| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2970 |
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| Symbol | |
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| ID | 5107688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3294054 |
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| End bp | 3295694 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504228 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001188457 |
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| Protein GI | 146307992 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.383632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0772174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGC AACTGCCTCT GCAACGTTTC AACCACTGGC TGGACCGGCA GCCCGATGCC
GTCTGGCTGC GCCAACCGGT GGCGGGCGTC TGGCACGACT TCACCTGGCG TCAGGTCGAC
GAGCAGGCCC GTCGTCTGGC CAGTGCGCTG CTGGCGTTGG GCTGCGTGCC CGGCGAGCGG
GTCGCGCTGC TGGCGAAGAA CTGCGCCGAA TGGTTCATCA GCGACCTGGC CATCCAGCAT
GCCGGGCTGG TCAGCGTGCC GCTGTATCCG CTGCAGGCTC CCGAGCAGAT CGCCTATGTG
CTGGAACATG CCGGCTGCAA GCTGATTCTG GTGGGCAAGC TGGACGAGCC GGACAAGCTG
GCCGGGGGAA TCGCGCCGCA TATTCCCCGC ATCGCCATGC CATACCCGAC CATGCCTGCC
GAGCACCAGT GGCACGCGCT GCTGGCCGCT CACGAGCCGC TGCAGGGCAC CCGCTCGCAG
CGCGGCGAAG ATCTGCTGTC GATCCTCTAT ACCTCCGGCA CCACCGGGCA ACCCAAGGGC
GTGATGCTCT CGGCCCATGC CATGGCCTTC TCCGCGGCGA ACGCCACGGC GGAGATGCGC
ATGACGCCGC AGGATCGGTT CTTCTCCTAT CTGCCGCTAT CGCATGCAGC CGAGCGCTTT
CTGGTGGAGT TCAACAGCCT CTACTGCGGA GCGCCGGTGG CCTTCGTCGA GTCGCTGGAG
ACCTTCGCCA GCGATCTGCG TCAGGTGCGG CCCACCGTGT TCTTCTCCGT GCCGCGGCTG
TGGACTCGCT TTCAGCAGGG TGTGCTGGAG AAACTGCCGG CGCAACGGCT CGAGCGCTTG
CTGCGCATTC CGTTGCTCGG TCGCCTGGTG GCGCGCAAGG TGCGGGCCGG GCTGGGGCTG
GATCGCGCGC GCATTCTGGT GTCCGGCGCG GCGGCGATTT CCACCGGGCT GCTGGAGTGG
TATCGACGTC TGGGCATGAC CCTCTGCGAG GGCTACGGCA TGACCGAGCA TTTCGCCTAC
GGCTGTTTCA ACCGTCCGGG GCAGGTGCGC TTCGGCACCG TGGGCCGGCC GATGCCGCAC
CTGCAGCTAC GCATCGATGA CAGCGGCGAG ATTCTGCTGC GCAGCGAGAC GCTGATGCAG
GGCTATTACC GCGAGCCGGA AAAGACCGCC GAAACGCTCA TGGATGGCTG GCTGCACACT
GGCGATCGTG GTCAGCTGGA CGAGGCGGGC TATCTGCGCA TCACCGGACG GGTCAAGGAC
ATCTTCAAGA CCAGCAAGGG CAAGTACGTG GCGCCGGCGC CCATCGAGGG CGAGATCGCC
AAGAACCACT GGGTCGAGCA GGTATGCCTG ATGGGCAGCA ATCTGGATCA GCCGCTGGCG
CTGATCGAAC TGTCACCCGC GGCCCGCCAG CAACCCCGGG AAGCTGTGAG CGAGGCGCTG
CAGCAACATC TGCAGGCACT CAACCAGCGC CTGGCGGTGC ATGAGCGCAT CAGTCATTTC
ATCCTGGTGC GCGAGGCTTG GACGGTGGAC AACGGCTGCA TGACGCCGAC CATGAAGATT
CGTCGCAACG TTCTCGAGGC GCACTATGCC GAGGCCATTG CCAGCCTGTC GGCGAGCGAC
GCCATCGTCT GGGAGCGTTG A
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| Protein sequence | MTLQLPLQRF NHWLDRQPDA VWLRQPVAGV WHDFTWRQVD EQARRLASAL LALGCVPGER
VALLAKNCAE WFISDLAIQH AGLVSVPLYP LQAPEQIAYV LEHAGCKLIL VGKLDEPDKL
AGGIAPHIPR IAMPYPTMPA EHQWHALLAA HEPLQGTRSQ RGEDLLSILY TSGTTGQPKG
VMLSAHAMAF SAANATAEMR MTPQDRFFSY LPLSHAAERF LVEFNSLYCG APVAFVESLE
TFASDLRQVR PTVFFSVPRL WTRFQQGVLE KLPAQRLERL LRIPLLGRLV ARKVRAGLGL
DRARILVSGA AAISTGLLEW YRRLGMTLCE GYGMTEHFAY GCFNRPGQVR FGTVGRPMPH
LQLRIDDSGE ILLRSETLMQ GYYREPEKTA ETLMDGWLHT GDRGQLDEAG YLRITGRVKD
IFKTSKGKYV APAPIEGEIA KNHWVEQVCL MGSNLDQPLA LIELSPAARQ QPREAVSEAL
QQHLQALNQR LAVHERISHF ILVREAWTVD NGCMTPTMKI RRNVLEAHYA EAIASLSASD
AIVWER
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