Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2966 |
Symbol | |
ID | 5107684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3291345 |
End bp | 3291839 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640504224 |
Product | hypothetical protein |
Protein accession | YP_001188453 |
Protein GI | 146307988 |
COG category | [S] Function unknown |
COG ID | [COG3091] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0041354 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.102756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAC AGCTCCACGC CCGTGTCGAG GCCTGCTACC AGCTGGCCGA AGCCTTCTTC AAGCAACGCT TTGCTCGCCC GGAAGTGAGT TTCAAGCTGC GCGGACAGAA GGCCGGCGTC GCCCACCTGA CGGAAAACAA GCTGCGCTTC AACCTGCAGC TGTATCGGGA AAACCGCGAG GACTTCCTGC GCCAGACGGT GCCCCACGAA GTGGCGCACA TGGTCGCCCA TCAGCTGTTT GGCCCGCGCA TCCAGCCGCA TGGCGAGGAG TGGCAGCTGA TCATGCGCGG CGTCTACGAG CTGGCGCCGC AGCGCTGTCA CAACTATGAA GTGCAGCGGC GCAAGGTCAG CCGCTTCATC TACCGCTGTA GTTGCCCCGA GGGCGAATTT CCCTTCTCGG CCCAACGCCA CGCGAAGGTG GCCAAGGGCC AACGCTACTA CTGCCGCCGT TGCAAGGTAA CGCTGCAGTT CACCGGTCAG CAGCGGGTGG AATAG
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Protein sequence | MPEQLHARVE ACYQLAEAFF KQRFARPEVS FKLRGQKAGV AHLTENKLRF NLQLYRENRE DFLRQTVPHE VAHMVAHQLF GPRIQPHGEE WQLIMRGVYE LAPQRCHNYE VQRRKVSRFI YRCSCPEGEF PFSAQRHAKV AKGQRYYCRR CKVTLQFTGQ QRVE
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