Gene Pmen_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2966 
Symbol 
ID5107684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3291345 
End bp3291839 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content63% 
IMG OID640504224 
Producthypothetical protein 
Protein accessionYP_001188453 
Protein GI146307988 
COG category[S] Function unknown 
COG ID[COG3091] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0041354 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.102756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAC AGCTCCACGC CCGTGTCGAG GCCTGCTACC AGCTGGCCGA AGCCTTCTTC 
AAGCAACGCT TTGCTCGCCC GGAAGTGAGT TTCAAGCTGC GCGGACAGAA GGCCGGCGTC
GCCCACCTGA CGGAAAACAA GCTGCGCTTC AACCTGCAGC TGTATCGGGA AAACCGCGAG
GACTTCCTGC GCCAGACGGT GCCCCACGAA GTGGCGCACA TGGTCGCCCA TCAGCTGTTT
GGCCCGCGCA TCCAGCCGCA TGGCGAGGAG TGGCAGCTGA TCATGCGCGG CGTCTACGAG
CTGGCGCCGC AGCGCTGTCA CAACTATGAA GTGCAGCGGC GCAAGGTCAG CCGCTTCATC
TACCGCTGTA GTTGCCCCGA GGGCGAATTT CCCTTCTCGG CCCAACGCCA CGCGAAGGTG
GCCAAGGGCC AACGCTACTA CTGCCGCCGT TGCAAGGTAA CGCTGCAGTT CACCGGTCAG
CAGCGGGTGG AATAG
 
Protein sequence
MPEQLHARVE ACYQLAEAFF KQRFARPEVS FKLRGQKAGV AHLTENKLRF NLQLYRENRE 
DFLRQTVPHE VAHMVAHQLF GPRIQPHGEE WQLIMRGVYE LAPQRCHNYE VQRRKVSRFI
YRCSCPEGEF PFSAQRHAKV AKGQRYYCRR CKVTLQFTGQ QRVE