| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2951 |
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| Symbol | |
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| ID | 5107669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3272160 |
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| End bp | 3274193 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504206 |
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| Product | 2,4-dienoyl-CoA reductase |
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| Protein accession | YP_001188438 |
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| Protein GI | 146307973 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.140431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTC GTTACCCGCA CCTGCTGGCC CCGCTCGATC TCGGCTTCAC CACGCTGAAG
AACCGCACCC TGATGGGCTC CATGCACACT GGCCTGGAAG AGAAGCCGGG CGGCTTCGAG
CGCATGGCGG CCTACTTCGC CGAGCGTGCC CGTGGCGGCG TCGGCCTGAT GGTCACCGGT
GGCATCGGCC CGAACGAGGA GGGCGGCGTG TACGCCGGCG CGGCCAAGCT GAGCACGGTC
GAGGAGGCGG AGAAGCACAA GGTCGTTACC CAGGCCGTGC ACGAGGCCGG CGGCAAGATC
TGCATGCAGA TCCTGCATGC CGGGCGCTAT GCCTACAGCC CGAAGTCGGT GGCGCCGAGC
GCCATTCAGG CGCCGATCAA CCCGTTCAAG CCGCGTGAGC TGGACGAGGA GGGCATCGAG
AAGCAGATCG CCGATTTCGT CAATTGCGCC GCGCTGGCCC AGCAGGCCGG TTACGACGGC
GTCGAGGTGA TGGGCTCGGA AGGCTACTTC ATCAACCAGT TCTTGGTAGC CCATACCAAC
CACCGTACCG ACCGCTGGGG TGGCAGCTAC GAGAACCGCA TGCGCCTGCC GGTGGAGATC
GTGCGCCGCG TGCGCGAGGC GGTCGGCCCG AACTTCATCA TCATCTATCG CCTGTCGATG
CTCGATCTGG TCGAAGGCGG CAGCACCTGG GACGAGATCG TCCTGCTGGC CAAGGCCATC
GAGCAGGCCG GCGCCACCCT GATCAACACT GGTATCGGCT GGCACGAGGC GCGCATCCCG
ACCATCGCCA CCAAGGTGCC GCGTGCGGCC TTCACCAAGG TCACCGCCAA GCTCAAGGGT
GAGGTGAAGA TCCCGCTGAT CACCACCAAC CGCATCAACA CCCCGGAAGT GGCCGAGCAG
GTGCTGGCCG AGGGCGATGC CGACATGGTG TCCATGGCCC GTCCGTTCCT CGCCGACCCG
GACTTCGTCA ACAAGGCCGC CGAGGGCCGC GCCGACGAGA TCAATACCTG CATCGGCTGC
AACCAGGCCT GTCTGGACCA CACCTTCGGC GGCAAGCTGA CCAGTTGCCT GGTCAACCCG
CGTGCCTGCC ACGAGACCGA GCTGAACTAC ATTCCCACCC AGCAGATCAA GAAGATCGCC
GTGGTCGGCG CCGGCCCGGC CGGGCTGGCC GCTTCCACCG TCGCGGCCGA ACGCGGCCAC
AGCGTGACCC TGTTCGACGC CGCCAGCGAG ATCGGCGGCC AGTTCAACGT GGCCAAGCGC
GTGCCGGGCA AGGAAGAGTT CTTTGAAACC CTGCGCTACT TCAAGCGCAA GCTGGAAACC
ACCGGTGTCG ACGTGCGCCT CAATACCCGC GTGTCGGTGG ATGACCTGGT GGCGGGCGGT
TTCGACGAGA TCATCCTGGC CACCGGTATC GCCCCGCGTA CCCCGGAGAT TCCGGGGATC
GAGCATGCCA AGGTGATCGG CTACCTGGAC GCCATCCTCG AGCGCAAGCC GGTCGGCCAG
ACGGTGGCGG TGATCGGCGC CGGTGGTATC GGTTTCGATG TGTCCGAGTT CATCACCCAC
CAGGGCAAGC CCACCAGCCT CGACCGTGAG GAGTTCTGGA AGGAGTGGGG CATCGACACG
GCGCTTGAGG CCCGTGGCGG CGTGGCGGGG ATCGAGGCGC AGCCGCATCC GGCGGCGCGT
CAGGTGTTCC TGCTACAGCG CAAGAAGTCC AAGGTCGGCG ACGGCCTGGG CAAGACCACC
GGCTGGATCC ATCGCACCGG TCTGAAGAAC AAGAACGTGC AGATGCTCAA CTCGGTCGAG
TACCTCAAGG TCGACGACGC CGGCCTGCAT ATCCGTATCG CCGGTGGCGA GCCGCAGGTG
CTGCCGGTCG ACACGGTGAT CGTCTGCGCC GGCCAGGATC CGCTGCGTGA GCTGCAGGCA
GGGCTGGAGA ACGCCGGCCA GCGCGTGCAC CTGGTCGGTG GTGCGGATGT CGCCGCCGAG
CTCGATGCCA AGCGCGCGAT CAACCAGGGC TCGCGTCTGG CGGCCGAGCT GTAA
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| Protein sequence | MTARYPHLLA PLDLGFTTLK NRTLMGSMHT GLEEKPGGFE RMAAYFAERA RGGVGLMVTG
GIGPNEEGGV YAGAAKLSTV EEAEKHKVVT QAVHEAGGKI CMQILHAGRY AYSPKSVAPS
AIQAPINPFK PRELDEEGIE KQIADFVNCA ALAQQAGYDG VEVMGSEGYF INQFLVAHTN
HRTDRWGGSY ENRMRLPVEI VRRVREAVGP NFIIIYRLSM LDLVEGGSTW DEIVLLAKAI
EQAGATLINT GIGWHEARIP TIATKVPRAA FTKVTAKLKG EVKIPLITTN RINTPEVAEQ
VLAEGDADMV SMARPFLADP DFVNKAAEGR ADEINTCIGC NQACLDHTFG GKLTSCLVNP
RACHETELNY IPTQQIKKIA VVGAGPAGLA ASTVAAERGH SVTLFDAASE IGGQFNVAKR
VPGKEEFFET LRYFKRKLET TGVDVRLNTR VSVDDLVAGG FDEIILATGI APRTPEIPGI
EHAKVIGYLD AILERKPVGQ TVAVIGAGGI GFDVSEFITH QGKPTSLDRE EFWKEWGIDT
ALEARGGVAG IEAQPHPAAR QVFLLQRKKS KVGDGLGKTT GWIHRTGLKN KNVQMLNSVE
YLKVDDAGLH IRIAGGEPQV LPVDTVIVCA GQDPLRELQA GLENAGQRVH LVGGADVAAE
LDAKRAINQG SRLAAEL
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