| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2944 |
|---|
| Symbol | ppnK |
|---|
| ID | 5107662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3264724 |
|---|
| End bp | 3265611 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640504199 |
|---|
| Product | inorganic polyphosphate/ATP-NAD kinase |
|---|
| Protein accession | YP_001188431 |
|---|
| Protein GI | 146307966 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0061] Predicted sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00985224 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.596503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAAT TTCGCAATGT CGGCATCATC GGGCGCCTGG GGAGCACGCG GGTGCTGGAG
ACCGTGCGCC GGCTCAAGCG CTTCCTCATC GACCGCCACC TGCACGTGAT CCTCGAGGAC
ACCATTGCCG ACGTGCTGCC TGGGCACGGC CTGCAGACCT CCTCGCGCAA GATGCTCGGC
GAAGTCTGCG ACCTGGTGAT CGTCGTCGGC GGCGACGGCA GCATGCTCGG CGCCGCCCGC
GCCCTGGCGC GGCACAAGGT GCCGGTGCTG GGGATCAACC GCGGCAGCCT GGGTTTTCTC
ACCGACATCC GCCCCGACGA GCTGGAACTC AAGGTGGCAC AGGTGCTCGA AGGTCAGTAC
CTGACCGAGA ACCGCTTCCT GCTCGAGGCC GAGGTGCGCC GCCAGGGCGA GGCCATCGGG
CAGGGCGATG CGCTCAACGA CGTGGTGCTG CACCCTGGCA AGTCGACGCG GATGATCGAG
TTCGAGCTGT ACATCGATGG CCAGTTCGTC TGCAGCCAGA AGGCTGACGG CCTGATCGTC
GCCACCCCGA CCGGCTCGAC TGCCTACGCG CTGTCTGCCG GCGGGCCGAT CATGCATCCC
AAGCTCGATG CCATCGTGGT GGTGCCGATG TACCCGCACA CCCTGTCCAG CCGGCCCATC
GTGGTCGATG GCAACAGCGA GCTGAAAGTG GTGGTGTCGC CGGACATGAC CATCTACCCG
CAGGTCTCCT GCGACGGCCA AAACCACTTC ACCTGCGCGC CGGGCGATAC CCTGCACGTG
GCCAAGAAGG CGCAGAAGCT GCGCCTGATC CATCCGCTGG ATCACAACTA TTACGAGGTC
TGTCGCACCA AGCTCGGCTG GGGTAGCCGT CTCGGAGGGC ATGACTGA
|
|---|
| Protein sequence | MEQFRNVGII GRLGSTRVLE TVRRLKRFLI DRHLHVILED TIADVLPGHG LQTSSRKMLG
EVCDLVIVVG GDGSMLGAAR ALARHKVPVL GINRGSLGFL TDIRPDELEL KVAQVLEGQY
LTENRFLLEA EVRRQGEAIG QGDALNDVVL HPGKSTRMIE FELYIDGQFV CSQKADGLIV
ATPTGSTAYA LSAGGPIMHP KLDAIVVVPM YPHTLSSRPI VVDGNSELKV VVSPDMTIYP
QVSCDGQNHF TCAPGDTLHV AKKAQKLRLI HPLDHNYYEV CRTKLGWGSR LGGHD
|
|---|
| |