| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2918 |
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| Symbol | |
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| ID | 5107636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3228929 |
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| End bp | 3230068 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504173 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_001188405 |
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| Protein GI | 146307940 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.81605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.120008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGT CATGGATCTT TCTGCCGCCG GAGGCCTGTC ACGCTCTATC GCTGGAGCTT
GCGGTGCAGC GGGTGACACC GGAGCAGAGC CAGACCCTGA GTCTGGCAGA GGCCTTGCGC
GAGCTGCCCG CCAGCTGGGA GCTGGTGCTG CCGGTGGAGG CGGTGACCAC CTGCGCGGTG
CAGCTGCCGA CGCAGAAGGC GCGCTGGCTG CGCCAGGCGC TGCCATTTGC GGTGGAAGAG
CTGCTCGCCG AGGATGTCGA GCTGATGCAT CTGGCGCTGG GCGAGAAAAT GGCCGATGGC
CGTCATCGCG TCTATGCGCT GCGGGCCGAC TGGCTGCGCG AGTGCCTGGC GCTTTGCGCC
GCGCAGCCGC CGCAGGCGAT TCGTGTGGAT GCCGATCTGC TGCCGCAGCA GGGCAGTCAG
CTGCTCTGGC TCGGTTCGCG CTGGTTGCTG GGCGGTGAGG TGCCCTGGCG GCTGGCCCTG
CAGACGGAGA ACTGGTCGGC GCTGGCCGGA CGCTGTCCTT CTCCCCGTAT CGCCAGTGCG
CCGGCCGGGC AGGCGTTGCC CGAGCCGGTC GACGAGGTGC ACCTGCTGGA GCAGCCGCAC
CAGTGGCTGG TGCGGCAGGG GGCGGGCGTC GACCTGGCGC AGGGTGAGTT CGCCCAGGTG
CAGACAGGGG CCGGCTGGCA GCGCTGGCGG CCGCTGGCCG GGGTCGTGGC GCTGTGCCTG
CTGCTGCAGT GGGGCTTCAA TCTGGCTCAG GGCTGGTACC TGCAGCGTGA GGCCGATGCC
TATGCCGCCT CCAGCGAGGC GCTGTATCGC CAGCTGTTTC CCGAAGATCG CAACCTGATC
AACCTGCGGG CGCAGTTCGA TCAGCATCTG GCGCAGACGG GCAGTGGCGA CAGCCTGGTG
CTGGAGCTGC TGGCGGAGGT GGCCGATGCG CTGCACGCCG ATGGCGCACC CCAGGTGCAG
ATCAATCAAC TGGACTACAG CGCCATTCGT GCCGACATGG CGCTGCAGAT TCAGGCGCCC
GGCTTTGCCG AGCTGGAACG CCTGCGCGAG CGCCTGGAGC AGGCCGGCCA GGCAGTGCAG
ATGGGCTCGG CGAGCCGTGA GGCGGATGGC GTCAGCGCGC GCCTGGTGAT AGGAGGATGA
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| Protein sequence | MNQSWIFLPP EACHALSLEL AVQRVTPEQS QTLSLAEALR ELPASWELVL PVEAVTTCAV
QLPTQKARWL RQALPFAVEE LLAEDVELMH LALGEKMADG RHRVYALRAD WLRECLALCA
AQPPQAIRVD ADLLPQQGSQ LLWLGSRWLL GGEVPWRLAL QTENWSALAG RCPSPRIASA
PAGQALPEPV DEVHLLEQPH QWLVRQGAGV DLAQGEFAQV QTGAGWQRWR PLAGVVALCL
LLQWGFNLAQ GWYLQREADA YAASSEALYR QLFPEDRNLI NLRAQFDQHL AQTGSGDSLV
LELLAEVADA LHADGAPQVQ INQLDYSAIR ADMALQIQAP GFAELERLRE RLEQAGQAVQ
MGSASREADG VSARLVIGG
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