| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2863 |
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| Symbol | |
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| ID | 5107778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3144490 |
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| End bp | 3145476 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504113 |
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| Product | taurine catabolism dioxygenase TauD/TfdA |
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| Protein accession | YP_001188350 |
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| Protein GI | 146307885 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.160357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0373471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAG TGACCGATCT GGCGCAGGCC GCCCTTAGCA TCGAAGCCGG CCTGCCCATG
CGCGTCAGCC CGCTACAGCC CGGGCAGGGC CTGCATGCCC ATCTGCCGGC CCTGCAGCAG
CTGGTGGCCG AGCATCTGGA GTTGAGCGGT GGCCTGCTGT TCAGTGGCTT CGCCGATGTC
GATGTGGCCA GCTTCCAGCA GTTTGCCGCG TCCTTCGGCC ATCCGCTGCT GAGTTACGAG
TTCGGCTCCA CGCCGCGTAG CCGGGTCAGT GCAGGCGGGG TGTATACCTC CACCGAATTT
CCCGCCCATC GCCCGATTCC GCTGCATAAC GAGCAGGCCT ACACCACCGA ATGGCCGCTG
CGCATCTGGT TCTATTGCGC CCAGGCAGCC GAGCAGGGCG GCGAGACGCC GATTGCTGAC
AGCCGCGAGG TGTTCCGGCG CATCGATCCG GCCATCCGCC AGCGCTTCGC CGAGCGCGGC
CTGCTTTACG TGCGCAATTA CGGCAATGGT CTGGATCTGC CCTGGCAACA GGTGTTCAAC
ACCGAAGATC GCCAGCTGGT CGAGCAATAC TGCCGCGCGC GACGTATCGA CTTCGAATGG
CTCGGCGATG ACGAGCTGCG TACGCGCCAG CTCTGCCAGG GCGTCGCTCA GCATCCGCGT
AGCGGTGACT GGGTCTGGTT CAACCAGGCG CACCTGTTCC ATCTGTCGGC CCTGGATGCC
GATACCCAGG AGGTGCTGAT CGATGCGGTC GGTCTTGAGG GGCTGCCGCG TAATGTCTAC
TTCGGAGACG GTACGCCCAT CGAGGCGAGC CTGCTGGATG AGGTGCGTGG CGTGCTGGAC
GCCTGCACCA TTCGCTTCCC CTGGCGCGAC GGCGATATTC TGATGCTCGA CAACATGCTC
ACGGCCCATG CCCGCGATCC TTTCAAGGGG CCGCGCAAGG TAGTGGTGGC GATGGCCGAG
GCCTACGGCC AGGAGGGCTT CCAATGA
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| Protein sequence | MNQVTDLAQA ALSIEAGLPM RVSPLQPGQG LHAHLPALQQ LVAEHLELSG GLLFSGFADV
DVASFQQFAA SFGHPLLSYE FGSTPRSRVS AGGVYTSTEF PAHRPIPLHN EQAYTTEWPL
RIWFYCAQAA EQGGETPIAD SREVFRRIDP AIRQRFAERG LLYVRNYGNG LDLPWQQVFN
TEDRQLVEQY CRARRIDFEW LGDDELRTRQ LCQGVAQHPR SGDWVWFNQA HLFHLSALDA
DTQEVLIDAV GLEGLPRNVY FGDGTPIEAS LLDEVRGVLD ACTIRFPWRD GDILMLDNML
TAHARDPFKG PRKVVVAMAE AYGQEGFQ
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