| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2859 |
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| Symbol | |
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| ID | 5107774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3140586 |
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| End bp | 3141809 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504109 |
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| Product | serine/threonine transporter SstT |
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| Protein accession | YP_001188346 |
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| Protein GI | 146307881 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3633] Na+/serine symporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00461767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0591164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAAG CCCTCCACCC TGCCCTGCAG CTGCTCAACC GCACCAGCCT GGTGATGCAG
ATCTTCATCG GCCTGCTGGC CGGTATCGCC CTTGCCCTGA TCGCCCCACA GGCGGCGCTG
TCGGTCGGCT TCGTCGGCAA CGTGTTCGTC TCGGCCCTGA AGGCCGTGGC GCCGGTGCTG
GTGTTCATTC TGGTGATGTC GTCCATCGCC AACCATCAGC ACGGCCAGCA GACCCATATC
CGCCCGATCC TGCTGATGTA TCTGATCGGT ACCTTCAGCG CCGCGCTGGT GGCGGTGGTC
GCCAGCTTCG CCTTCCCGTC GTCGCTGGTG CTGAGCAGCC AGGCCGCCGA ACTGACGCCC
CCCGGCGGCA TCGGCGAGGT GCTCAAGACC CTGCTGCTGA ACATCGTCGA CAACCCGGTC
AACGCCCTGC TGCGCGGCAA CTTCATCGGC ATCCTGGCCT GGGCCATCGG CCTCGGCTTC
GCCTTCCGCC ACGCCAGCCC CGGCAGCAAG CAGCTGCTGG GCGATCTGGC CAACGGCGTG
ACCGCCATCG TCAAGCTGGT GATCCGCCTG GCGCCGCTGG GCATCTTCGG CCTGGTCGCC
GCGACCCTGG CCGAGTCCGG CTTCGATGCC CTGCTCGGTT ACCTGCACCT GCTGGTGGTG
CTGGTGGGCT GCATGCTGCT GGTGGCCCTG GTGATCAACC CGGCGCTGGT GTACTGGAAG
CTGCGCCGCA ACCCCTACCC GCTGGTGCTG ACCTGCCTGC GCGAGAGCGG CATCACCGCC
TTCTTCACCC GCAGCTCGGC CGCTAACATC CCGGTCAACC TGCAGCTGTG CCAGCGCCTG
GGCCTGCATG AGGAAACCTA TTCGATCTCC ATCCCGCTGG GCGCCACCAT CAACATGGCC
GGCGCGGCGA TCACCATCAC CGTACTGACC ATGGCCGCGG TGCATACCCT GGGCATCGCC
GTCGACCTGC CCACCGCCCT GCTGCTGAGC GTGCTGGCCT CGATCAGCGC CTGCGGCGCC
TCGGGCGTGG CCGGCGGCTC GCTGCTGCTG ATCCCGCTGG CCTGCAGCCT GTTCGGCATC
CCCAACGAGG TGGCCATGCA GGTGGTGGCC ATCGGCTTCA TCATCGGCAT CGTGCAGGAC
TCGGCGGAAA CCGCGCTGAA CTCCTCCACC GACGCCCTGT TCACCGCTGC CGCGTGCATG
GCGGAAGAGC AGCGTCAGGC CTGA
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| Protein sequence | MSQALHPALQ LLNRTSLVMQ IFIGLLAGIA LALIAPQAAL SVGFVGNVFV SALKAVAPVL
VFILVMSSIA NHQHGQQTHI RPILLMYLIG TFSAALVAVV ASFAFPSSLV LSSQAAELTP
PGGIGEVLKT LLLNIVDNPV NALLRGNFIG ILAWAIGLGF AFRHASPGSK QLLGDLANGV
TAIVKLVIRL APLGIFGLVA ATLAESGFDA LLGYLHLLVV LVGCMLLVAL VINPALVYWK
LRRNPYPLVL TCLRESGITA FFTRSSAANI PVNLQLCQRL GLHEETYSIS IPLGATINMA
GAAITITVLT MAAVHTLGIA VDLPTALLLS VLASISACGA SGVAGGSLLL IPLACSLFGI
PNEVAMQVVA IGFIIGIVQD SAETALNSST DALFTAAACM AEEQRQA
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