| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2840 |
|---|
| Symbol | flgL |
|---|
| ID | 5107755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3120954 |
|---|
| End bp | 3122642 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640504090 |
|---|
| Product | flagellar hook-associated protein FlgL |
|---|
| Protein accession | YP_001188327 |
|---|
| Protein GI | 146307862 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | [TIGR02550] flagellar hook-associated protein 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.878588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.22747 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCATGC GCATCTCTTC CATCCAGGCC TTCAACAACG GCGTTTCCGG CCTTGGGCGC
AACTACTCCA ACCTGATTCG CACCCAGGAG CAGATCAGCA GCGGCAACCG CATCCTCACC
CCGGCGGACG ATCCGGTGGC CTCGGTGCGT CTGCTGCAGC TCGAGCAGCA GCAGGCCGTG
CTCAAGCAGT ACAGCGACAA CCTCACGGCT GCCAAGAACA GCCTCACCCA GGAAGAGACC
ACCCTCAATT CGGTGGTCAC CGTTATGCAG CGCGTGCGCG AGCTGGCGGT GCGCGCGGGC
GGCGGTTCGC TGTCGGCCGA AGACCGCAAC TCCATCGCCA AGGAGCTTTC CGAGCGCGAG
GCCGAGCTGC TCAACCTGAT GAACAGCCGT AATGCCCGGG GCGAGTACCT GTTTGCGGGG
AATCTGGGCA AGACCGAACC CTTCGTGCGC AACCCGGACG GCACCTATTC CTACTTCGGC
GACGAAGGGC AGCGCACCCT GCAGGTGGCC AGCTCCACCA ACGTGGCGAT CAACGACAAC
GGCAAGCGCC TGTTCGAGAG CGTGACCAAC GCCAACCGCG TGGCCAACGC CAACGGTGTC
AACAATCCGG CGCTGCCGTC GCCACCGCTA CCGGCGACCA CCATTCCCGC CGTGCCGGCC
AACGAGCAAC GGGTTTTCAT CTCGCCCGGG CTGGTGGAGG ACAATCGCGC CTTCAACGCC
GATTTCCGCG GCGGCGAACC CTATTCGCTG GCGTTCGTCA GCGGTACCGA GTTCCGCATC
TACGACGCCA GCGGCGCCGA CGTGACCTCG GAGATTCCGG GGGGCGGCAA GATCGATCCG
CTGGTCAACG GCGGCAACGT CATCAATTTC CGCGGTATGC GTTTTCAGCT CGATGTGGTG
CTCAAACAGG GCGACAACGA GCTGAATCTG GACAGCCTGC TGGCCGACAT CCAGCCGCCT
GCCACCGCCG GTTCACCGGG TATCGGTACC CACAGCTTCA CCCTGCAGTC CGCGCCAACC
GAGTTCGCCG TCACCCGTGC TTCCACCAAC GGCTCGGCGG CAGTCGTGGC GGGCGGCAAC
ATCGTCAACC AGAACGTGTT CGACAGCCAG TTCCCCACCT CCGGCGTGGT GTTGCGCTTC
ACCGACGACA GCAACTACGA GGTCTTCGCC CAGCCCGTCG GTCCAAACAG TCCGGTGCTG
ACCACCGGTA CCGTCACTGG TCCTTATCCG GCCAGTTTCA CCGTGTATGG CGCCGAGTTC
ACGCTGTCCG GCCCGGCCAG CGCCGGCGGT GGCGACCAGT TCGGCGTGCA GCCCCAGTTC
CAGGAACAGC GCAGCATCCT CAACACCATT TCCCGGCTGC GTCAGGCGCT GGAGTCGTCG
CCCACCTCGC CGGCCGGGAA TTTGGCTGTG CGCAACGAGG TGGCCATCGC CCTGAAGAAC
CTCGACAACG GCATGGGCAG CGTGCTGGAA GTGCAGACCG AGATCGGCGC GCGCCTCAAC
CTGATCGAGA CCACCGGGAT CGACAACGAG GACGTGACCC TGGTGAACAA GTCGGTACAG
GCCGAGCTGC GCGAGCTGGA TTACGCCGAG GCATTGTCGC GCCTGTCGTT CCAGACCATC
ATTCTGGAGG CGGCGCAGCA GAGCTACGTG AAGATCGCCG GGCTGAATCT GTTCAATCAG
TTGCGCTGA
|
|---|
| Protein sequence | MVMRISSIQA FNNGVSGLGR NYSNLIRTQE QISSGNRILT PADDPVASVR LLQLEQQQAV
LKQYSDNLTA AKNSLTQEET TLNSVVTVMQ RVRELAVRAG GGSLSAEDRN SIAKELSERE
AELLNLMNSR NARGEYLFAG NLGKTEPFVR NPDGTYSYFG DEGQRTLQVA SSTNVAINDN
GKRLFESVTN ANRVANANGV NNPALPSPPL PATTIPAVPA NEQRVFISPG LVEDNRAFNA
DFRGGEPYSL AFVSGTEFRI YDASGADVTS EIPGGGKIDP LVNGGNVINF RGMRFQLDVV
LKQGDNELNL DSLLADIQPP ATAGSPGIGT HSFTLQSAPT EFAVTRASTN GSAAVVAGGN
IVNQNVFDSQ FPTSGVVLRF TDDSNYEVFA QPVGPNSPVL TTGTVTGPYP ASFTVYGAEF
TLSGPASAGG GDQFGVQPQF QEQRSILNTI SRLRQALESS PTSPAGNLAV RNEVAIALKN
LDNGMGSVLE VQTEIGARLN LIETTGIDNE DVTLVNKSVQ AELRELDYAE ALSRLSFQTI
ILEAAQQSYV KIAGLNLFNQ LR
|
|---|
| |