| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2836 |
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| Symbol | |
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| ID | 5107751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3113531 |
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| End bp | 3118810 |
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| Gene Length | 5280 bp |
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| Protein Length | 1759 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640504086 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001188323 |
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| Protein GI | 146307858 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0244809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGC AGGATCAGGG AGATGTCGCT CGACAGTTCT GGCGCTCCAG CAAACGAGGG
CAGATTGGGC CGGAGCAACT CTACGAGCGG CAACGCGAGC ACCTGCAGCA GGATATTATT
CCCTTGCTGG AGGGCGATGC ACGGCTGTTG GATATCGGTT GCGCTGATGG CGAGTTCAGC
CTTCTGTTTG CACAGAAGGT TGCACACGTG CTGGCATTCG ACATCGGCGA GGAACTTGTT
GCTCAGGCGC GCGAACGCGC AGAGCACCTG GGTATTGGCA ATATCGAGTT TCGAGTCGCC
GACATTTTCG AGTTTCAAAC TGACGAGCGT TTTGACGCCG TCAGTCTGAT GGGGGTTCTT
ACCTGTATCA GCGACGATAA CGCTGCTGCC CGCGTGTTGC TGAAGGCGAC CTCCCTGCTG
AAGCCTGGTG GTCTGCTGAT ACTGAAGGAT TCCGTGCTCT TGCATGGGCA GGAGCCGCGT
TATCTGCTCA CCGAGCACTA TGAGGCCAAG TATCGCCCTG AAGCTCGCTA TCTGGCGTTA
ATCCGCTCCA TGGGCCTGCA TGAGGTTGCA AATTACCCAT TGCTGACCAT GGACAACTGC
GAGCAGACCA GCGTTCTGTA CCTGTTTCGC CCTGTCTTGG CTCAGCAGCC GTCATTACCG
ATCCGTGGAT TGCGAGTTGC CTGCTACGGC AGCATGCCAT TTCATTTTCG CTCCCTGCGG
CCTCTGGCCG AGTGTTTCGA AGACAGTCTG CTGAGCTTGT CCATCGAGGA GGTCATGGCC
TGGCGGCCCC AGGTCATCGC AGTGGCGGAT GGCTGGTCGG TGGAATTCTG GCGTGATTAC
TGCGATGCCC ATCAGGTTCT GTTGATCGGT ATGCGCCATG GCTCGGTGAC TCGATATGGA
TTTGCCGAGC CTCAGTACAA TCATGCCGAC TACCTGTGCG GTAGTGTCTG GGATATCGAA
GATACCCTGC TGTCGGACGT GCATCCGCGC CTTGGTTTTC TGCTAACGGG AAACTCATGG
GTCGACCAGG TCTTCAGATT GCCGCCCAGA GCCGATTTTG ACGCCCAACC GACCATCCTT
TTTGCCCCCA CCTACAATCC CGAGATCAGT GCTGCGGTCT ATTTCGGCGA GCGTGTCGTT
TCGCTGATCC GCAGTATCTA TCCGCAAGCC CGGATCATCA TCAAACCGCA TCCAGCGATT
GTTCAGCACG AGCATGGTTT CGTGGTGGAC AAGGGACTGT TCCGTGAGTT GATGGCCGTC
TGGCGCGCGC AGGTCGCTGA AGATCCTTTG TTGCAGTTGG TCGATGACCC TGAGGCGAGC
ATTGCCGATA GCTTTGCCGA GGCCGACATT CTGGTGGCGG ACCGTTCCTC GCTGCTGTTC
GAGTACATGG TTCTGGACCG ACCCATTTTG CTGTATTCGA GCGATGCCCG GGTCGAGCAT
TGGGATTACA ACCCGCAAGC TCCTGGCAAT GCATGGCGCG ATATCGGTAT GGAGTTCAGT
GATGACTCCA GCTTCCTGGC GCTGTTGAGG GATGCCAGAC GAAATCATCA GGAGTTTTGT
CGTGAGCCGC AGGCTCGGCG TACCCGTCAG CTCTACGGCG ACTTCCGTGA TGGCCGCTCG
GTGCAGCGCG TGGCAGCCGC CATTGCTCAG GTGCCCAGGC CTCATGTTCT GATTAATTCG
TGGGATAGCA AGCGAAGTGC AGCGTTGCTC GAGGCGTTCG ATGATCGCCT CGCTTTCAAG
CGTATCTCGC TCATCGGCTC CCAGGTGAGT TCGGAGCAAT TACACGATGT ACGCCAGTAC
GAGGATTTCT CCCAGTGGCG GCGGGCGCAG TCTGATCGGG AGCTTGATCA GGCGGTATTG
CTTGTCGATG GCCGTAGTTC GTACCAGCCT GGCAGCGCAA ACCAGATATG TCACGGCCTG
GCGTTGCTGG CGCGAGGAGA TGCGGATGCG CAATTGCTGA GCCAGCGGTC CCATGATGAG
CCGGCTCTGA CTGGCGCTAC GGCTGAGGAA TGGATTCGAG AGCGTCAGAA CTGGGCATTG
GATGCTCTGC TGGGTGAGCC TGTCTGGCAA CTGCTGCCTG CCCATCGTTT ACGAAGGGCG
TTGCGAGTCT TGCCGGTTTC TCTGAGCGAT GGTGTCGTGG CCACTTGGTG GAAAACGCTA
TGCGCGCAAG GGCAAACCGT GCATTGGCGA TCCGAGCGGC TCGATGTGGT CATGGATGCT
TCTGTCGTGC GTGTGGTTGG GCGCGGTCAT TATCTGGCTG GCCCCAAGGC CAGATTACAG
CTTGTACCGG CTGTGCAGGG CTGGCCACGG CATCAGGCGG CCGTGCATCT GCAAATCTGC
GCTGTAGAGG GCGCTGACTA TGATCGTTTC CCTTTCAAGG CCGATATTCG CCTCAATGGC
GTGCGCTGGC GCGAGATAAG CTTCTCCAGT TTCCGGCCGC AGTGGATTGC TCTGCCGTTT
CATCCCAACG AGGCAGGGGT AGTAGAAGTC GAACTGCATA GCAGTGCCAT GTTCCCGGGG
ATGACCGGAT TGGCTGGCCC GCTGTCCGTG GCGCTGGCTT TTGCCGACGA GGCGCCTGAA
GAAGCAAGTT CCGATAGCGA CAGCTCGACG CAATTGCTGG AGCAATGGCT AGCCGCTAGG
CAGTTGACTC CAGTGCAGCA GCGATTGGTC GTCGAGCGTC TTGGGCAATA TGCTGGTGGA
CCTGCCTTCG GCGTCGTGAT TCTCGATCCG GAAGGTGACG CAAGCCTTGT TGCGACTACG
CTGCGAAGCC TGTTCCGGGA AGATTCCCTG TATCAGGTGC AGAAGGTCGT GGTGCTCTCG
AGCGCAGACA CGGCAACCAC CGCTGCGGAT GCACGTCTGC ATTTTCTGCA GATCGAATCG
GATCACTATG CCGAGGCGAT CAATACCTTG GTCGAGCAGG GTGGTTATGA CTGGTTCATG
CTTGCCCGTG CCGGTGATCA GTTCACCCAG CATGGATTGT TGATGGCGGC TTTGGCTCTG
CTTGAGGCGC CTGGCTGTCG TGCCATTTAT GGTGATGCCT TGCAGCGAAT GGGGGATTCC
AGTCTGGGGG CGGTTCTGCG CCCAGACTTC AATCTCGATA TGTTGCTGAG CTTCCCTGCC
GCCATGGCGC GGCACTGGCT ATACAGGCGC GAGGACTTCC TGGCCATCGG CGGTTTCGAT
CCGGTTTATG GCGGTGCGTT GGAGTTCGAC TTGCTTTTGC GTTTGATCGA GCATGGCGGC
ATGGTGGGGC TTGGCCATAT CGATGAGCCC TTGGTCGTGG CCGAGGCGCC TAGGCTGCAG
GACAACGAGT GTGAACGCGC CACCCTGTTG CGCCACTTGG CCTTGCGCGG TTACCAGGCT
TCGCTGAAAC CTCATATGCC GGGGCGCTAC CGCATTGACT ACGGTCACTC GGTGCAGCCG
TTGGTGTCGA TCATCATACC CACCAAGGAC CAATTGCCGA TTCTGCAGCG TTGTGTGGAA
AGCCTGCTGG AGAAAACGCG TTATCCGAAC TATGAGGTTC TGATAGTCGA CAACGATAGC
CAGACGCCCG AAGCGCAGGC CTGGCTGGCT GGCGTGGAAA GCTGGGGAGA GTCGTTGGTG
CGGGTCTTAC GCTACCCGTA TCCGTTCAAC TATTCGGCCA TCAACAATAT GGCCGCCCAG
GCCGCGCGCG GCGAGTACTT GGTGCTGCTC AACAACGATA CGGCCATCCT GCGTGAGGAT
TGGCTGGGTG CCATGCTCAA TCATGCGCAG CGTCCGGAAG TGGGTGTGGT CGGTGCCAAG
CTGCTCTATC CGGATGGCCG CATCCAGCAC GCCGGGGTTG TTCTCGGCTT GCGCGGACCT
GCAGATCATC CTTTCATTGG CGAGGCCATG GATGCGCCGG GGTATATGCA GCGCCTGCAG
GTGGATCAGA ACTACAGCGC AGTGACTGCG GCCTGCCTGA TGATCCGCAA GTCTCTCTAT
GAAGAAGTGG GTGGGCTCGA TGAGGAAGCC TTCAAGGTTT CCTATAACGA TGTCGATCTT
TGCCTGAAGA CGCGTGAGGC TGGCTACCTC ACGGTATGGA CGCCGCATGC CGTCGTAATG
CACGAGGGCA GCGTCAGTCA GACCAAGGTC GATCCGGCGG CTCAGGAGGC CAAGCGCAAG
CGCTTCGTTG CCGAACAAGA TGCCATGTAT GCCAAATGGT TGCCGCTGAT CGCCGCCGAT
CCCGCATACA ACCGCAGCCT TTCGTTGAGC GGAGCCGGGT TTGCTCTGGA AGCCGATTCG
CAACTGACCT GGCGTCCGCT GGATAGTTGG CGTCCACTAC CCGTTGTGCT TGCTCACCCG
GCTGACCCCT GGGGGTGCGG TAACTACAGG GTCATCAAGC CATTCGAGGC GATGCGCGAT
GCGGGGCTTA TCGATGGCAT GCTTTCTGAT GGGCTCTTGC AGGTGGCTGA TCTTGCGCGT
TACGACCCTG ATGTACTGGT GCTTCAGCGC CAACTGAGCG ACGAGCGCCT GGAGGCCATG
CGCAGGATCA AGACGTTGTC ACGAGCGTTC AAGGTCTACG AGCTGGATGA TTACCTACCG
AACCTGCCGA TGAAGAGCCT GCACCGCGAA CACATGCCCA GGGATGTGCT GAAATCGTTG
CGTAAAGGCT TGGGGTTCGT TGATCGCTTC GTGGTGTCTA CCGAGGCATT GGCTGATGCC
TTCTCGGGCT TGCACGCCGA TATCCGGGTG ATCGAAAACC GATTGCCTCG CGAGTGGTGG
CAGAACCTGA CCAGTCAGCG ACGACGTGGG CGCAAGCCTC GCGTCGGTTG GGCAGGGGGT
GTCAGTCACA CCGGGGATCT GGAACTGATC GCCGATGTGG TCAAGGAGTT GGCTGGTGAG
GTTGAGTGGG TATTCATGGG GATGTGTCCG GATCGCATCC GCCCCTACGT GCAGGAAGTG
CATGCTGGTG TAGATATCAA CGCCTACCCG GCGGCCTTGG CAAGCCTGGA TCTGGACCTG
GCTCTGGCGC CTGTGGAGCA AAACCTGTTC AACGAGTGCA AGAGCAAGTT GCGCCTTCTG
GAATATGGCG CCTGTGGTTT CCCCGTGGTG TGCAGCGATC TGCGTTGCTA CGAAGGTGAG
CTACCCGTGA CGCGGGTGAA AAACCGCTTC AAGGACTGGG TCGATGCCAT CCGTGTGCAT
GTCAATGATC TTGATGCGTC CGCTCACCAG GGCGATGCGT TGAGGGCTGC AGTCATGCGC
GACTGGATGC TTGAGGGAGG GAATCTCGAG CTCTGGCGCC GCGCCTGGTT ACCGGATTGA
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| Protein sequence | MSKQDQGDVA RQFWRSSKRG QIGPEQLYER QREHLQQDII PLLEGDARLL DIGCADGEFS
LLFAQKVAHV LAFDIGEELV AQARERAEHL GIGNIEFRVA DIFEFQTDER FDAVSLMGVL
TCISDDNAAA RVLLKATSLL KPGGLLILKD SVLLHGQEPR YLLTEHYEAK YRPEARYLAL
IRSMGLHEVA NYPLLTMDNC EQTSVLYLFR PVLAQQPSLP IRGLRVACYG SMPFHFRSLR
PLAECFEDSL LSLSIEEVMA WRPQVIAVAD GWSVEFWRDY CDAHQVLLIG MRHGSVTRYG
FAEPQYNHAD YLCGSVWDIE DTLLSDVHPR LGFLLTGNSW VDQVFRLPPR ADFDAQPTIL
FAPTYNPEIS AAVYFGERVV SLIRSIYPQA RIIIKPHPAI VQHEHGFVVD KGLFRELMAV
WRAQVAEDPL LQLVDDPEAS IADSFAEADI LVADRSSLLF EYMVLDRPIL LYSSDARVEH
WDYNPQAPGN AWRDIGMEFS DDSSFLALLR DARRNHQEFC REPQARRTRQ LYGDFRDGRS
VQRVAAAIAQ VPRPHVLINS WDSKRSAALL EAFDDRLAFK RISLIGSQVS SEQLHDVRQY
EDFSQWRRAQ SDRELDQAVL LVDGRSSYQP GSANQICHGL ALLARGDADA QLLSQRSHDE
PALTGATAEE WIRERQNWAL DALLGEPVWQ LLPAHRLRRA LRVLPVSLSD GVVATWWKTL
CAQGQTVHWR SERLDVVMDA SVVRVVGRGH YLAGPKARLQ LVPAVQGWPR HQAAVHLQIC
AVEGADYDRF PFKADIRLNG VRWREISFSS FRPQWIALPF HPNEAGVVEV ELHSSAMFPG
MTGLAGPLSV ALAFADEAPE EASSDSDSST QLLEQWLAAR QLTPVQQRLV VERLGQYAGG
PAFGVVILDP EGDASLVATT LRSLFREDSL YQVQKVVVLS SADTATTAAD ARLHFLQIES
DHYAEAINTL VEQGGYDWFM LARAGDQFTQ HGLLMAALAL LEAPGCRAIY GDALQRMGDS
SLGAVLRPDF NLDMLLSFPA AMARHWLYRR EDFLAIGGFD PVYGGALEFD LLLRLIEHGG
MVGLGHIDEP LVVAEAPRLQ DNECERATLL RHLALRGYQA SLKPHMPGRY RIDYGHSVQP
LVSIIIPTKD QLPILQRCVE SLLEKTRYPN YEVLIVDNDS QTPEAQAWLA GVESWGESLV
RVLRYPYPFN YSAINNMAAQ AARGEYLVLL NNDTAILRED WLGAMLNHAQ RPEVGVVGAK
LLYPDGRIQH AGVVLGLRGP ADHPFIGEAM DAPGYMQRLQ VDQNYSAVTA ACLMIRKSLY
EEVGGLDEEA FKVSYNDVDL CLKTREAGYL TVWTPHAVVM HEGSVSQTKV DPAAQEAKRK
RFVAEQDAMY AKWLPLIAAD PAYNRSLSLS GAGFALEADS QLTWRPLDSW RPLPVVLAHP
ADPWGCGNYR VIKPFEAMRD AGLIDGMLSD GLLQVADLAR YDPDVLVLQR QLSDERLEAM
RRIKTLSRAF KVYELDDYLP NLPMKSLHRE HMPRDVLKSL RKGLGFVDRF VVSTEALADA
FSGLHADIRV IENRLPREWW QNLTSQRRRG RKPRVGWAGG VSHTGDLELI ADVVKELAGE
VEWVFMGMCP DRIRPYVQEV HAGVDINAYP AALASLDLDL ALAPVEQNLF NECKSKLRLL
EYGACGFPVV CSDLRCYEGE LPVTRVKNRF KDWVDAIRVH VNDLDASAHQ GDALRAAVMR
DWMLEGGNLE LWRRAWLPD
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