| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2831 |
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| Symbol | fliS |
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| ID | 5107746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3108945 |
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| End bp | 3109325 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640504081 |
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| Product | flagellar protein FliS |
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| Protein accession | YP_001188318 |
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| Protein GI | 146307853 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1516] Flagellin-specific chaperone FliS |
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| TIGRFAM ID | [TIGR00208] flagellar biosynthetic protein FliS |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.161705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0204753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGCAA TGGCGGCCCT CAGGCAGTAT CAGACCGTCA ACAACCAGGC CCAGGCTGCA
GAGGCCAGCC CTCATCGTCT GATTCAGATG TTGATGGAGG GCGGTCTGTC TCGGATCGCT
CAGGCACGTG GTGCCATGGA GCGCGAGCAG ACGGCGCTCA AGGGCGAGTT GATCGGCAAG
AGCATCGCCA TCATCGCGGG CCTGCGCGAA AGTCTCGACC ATCAGCAGGG TGGCGAACTG
GCGGGTAATC TCGATAGCCT GTACGAATAC ATGATCGCCC GTTTGACCGA GGCCAACGTC
AGCAACGAGC CTGCGTTACT CGAAGAGGTC TCCGAGCTGC TGCGCAACGT CAAACAGGGT
TGGGATGCCA TCGCCCAGTA A
|
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| Protein sequence | MNAMAALRQY QTVNNQAQAA EASPHRLIQM LMEGGLSRIA QARGAMEREQ TALKGELIGK
SIAIIAGLRE SLDHQQGGEL AGNLDSLYEY MIARLTEANV SNEPALLEEV SELLRNVKQG
WDAIAQ
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