| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2827 |
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| Symbol | |
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| ID | 5107742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3104096 |
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| End bp | 3105508 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504077 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001188314 |
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| Protein GI | 146307849 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0126149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCA AAGTCCTGCT GGTTGAAGAC GATCGCGCCC TGCGCGAAGC CTTGGCCGAT
ACCCTGTGCC TGGGCGGGCA TGATTATCGT GCGGTCGATT GTGCCGAGGC GGCCTTGGTC
GCCCTGACCG AGGAGCCCTT CGGCCTGGTG GTCAGTGACG TCAACATGCC GGGCATGGAT
GGGCATCAGT TGCTGGCGCA GATCCGCGCT CGCTATCCGC AGCTGCCGGT ACTGCTGATG
ACGGCCTTCG GCGCCGTGGA GCGGGCGGTG GATGCGATTC GCCAGGGGGC TGCCGATTAT
CTGGTCAAGC CGTTCGAGCC GCGCACCTTG CTGGAACTGG TGGCCAGGCA TGCGCTCGGC
AAGCTGCCGG CGGGGGATCG CGACGGCCCG GTGGCGCTCG AGCCGGCCAG CGTGCAACTG
CTGGAGCTGG CGGCCCGGGT AGCGCAGAGC GATTCGACGG TGATGATCAC CGGTGAGTCC
GGTACCGGCA AAGAGGTGCT GGCGCGCTAC ATCCACCAGC AATCCCCGCG TTCGTCCAGA
CCGTTCATCG CTATCAACTG CGCGGCGATT CCCGACAACA TGCTCGAGGC CACGCTGTTC
GGCCATGAAA AGGGGGCGTT CACCGGTGCG GTCACGTCCC AGCCGGGCAA GTTCGAACTG
GCCGATGGCG GCACCATCCT GCTCGACGAA ATTTCCGAGA TGCCCCTAGG TCTGCAGGCC
AAGCTGCTGC GCGTGTTGCA GGAGCGCGAG GTGGAGCGGG TCGGAGCGCG CAAGCCGATC
ACCCTGGACA TCCGCGTGCT GGCCACCAGC AACCGCGACC TGGCCAGTGA AGTGGCCGCT
GGGCGTTTCC GTGAAGACCT CTACTATCGG CTTTCGGTCT TCCCGCTGGC CTGGCGGCCG
CTGCGCGAGC GTCCTGCCGA CATTCTGCCG CTGGCTGAGC GGCTGCTGGC CAAGCACGTC
AAAAAAATGA ATCAGGCGCC GGTGCGGCTG TCCGAGTCGG CTGCACAAAG CCTGGTGCAG
CACCCCTGGC CAGGCAACGT GCGCGAGCTG GACAACGCCA TCCAGCGTGC GTTGATTCTC
CAGCAGGGTG GAGTGATTCA GGCGCAGGAT CTCTGCCTGC ACGCACCCAT CGGCCAAAGC
GTACAGGGCA CCGCGCCTCG CCTGGCGGTC GTACCCAGTG CGCCCGTTGC GCCGCCGGTG
GCGGAGGAGG CGATGGTGGC CGATGGCGGC GCTCTGGGTG AGGACCTGCG GCGTCGTGAG
TTCCAGGTGA TCATCGATAC CCTGCGGGCC GAGCGCGGCC GCCGCAAGGA GGCTGCCGAG
CGTCTGGGCA TCAGCCCGCG CACCTTGCGC TACAAGCTGG CGCAGATGCG CGACGCCGGC
ATGGATGTCG AGGCCTATCT CTACGCCAGC TAG
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| Protein sequence | MAAKVLLVED DRALREALAD TLCLGGHDYR AVDCAEAALV ALTEEPFGLV VSDVNMPGMD
GHQLLAQIRA RYPQLPVLLM TAFGAVERAV DAIRQGAADY LVKPFEPRTL LELVARHALG
KLPAGDRDGP VALEPASVQL LELAARVAQS DSTVMITGES GTGKEVLARY IHQQSPRSSR
PFIAINCAAI PDNMLEATLF GHEKGAFTGA VTSQPGKFEL ADGGTILLDE ISEMPLGLQA
KLLRVLQERE VERVGARKPI TLDIRVLATS NRDLASEVAA GRFREDLYYR LSVFPLAWRP
LRERPADILP LAERLLAKHV KKMNQAPVRL SESAAQSLVQ HPWPGNVREL DNAIQRALIL
QQGGVIQAQD LCLHAPIGQS VQGTAPRLAV VPSAPVAPPV AEEAMVADGG ALGEDLRRRE
FQVIIDTLRA ERGRRKEAAE RLGISPRTLR YKLAQMRDAG MDVEAYLYAS
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