Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2817 |
Symbol | |
ID | 5107613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3094129 |
End bp | 3095355 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640504067 |
Product | flagellar hook-length control protein |
Protein accession | YP_001188304 |
Protein GI | 146307839 |
COG category | [N] Cell motility |
COG ID | [COG3144] Flagellar hook-length control protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0900744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGT TGCCCGACCT ACGCCTGCAG GCCACGCCTG AGGCGAAGAG CAAAGCGAAG CAGCCGGCCA AAGCGCCGGA GCCCAGCAAG AAAGAGGCTT CCAGCTTTGC CGAGGTGTAT GCCAAGGAGC GCCAGGCCAA GCCTGGTGAG CGCTCTGGCA GCACTGCAAA ATCCAGCCAG GAGCAGCCGG CCAAGCCCGG TGCCGAGGCT TCGACCCCAG CCGCGACTGC CGCCGAACAA CCGGTCGTTG CCGCCCCCGG CAATTCCTTG CCGGCCGAGG AGGGCACGCA GGAGGCGCTC GATCCCTTGC TGGCCATGGC CCTTGGCGGC ATGCCGCTGC CGGCTGACGT AGTGCCTGCT GCCGAGGAAG CGCTGCCGCC CGAGGCTCTG CTGATCACCG GCTTTGCCGG CGACAGCGCC GAAGAGACAC AGCCGTTGCT GGAGCCTGAG GTCGATGACC CCCTGGCCAT GCTCGCCGAG CTGCCGGAGG AGGAGGTCAA GACCCAGCCC GTGCAGGAGG CAGTGAGCAG AAGTGCGCGG ATCTCCACCA GCACCGATTT CGCCGCGGCC ATGGCGGCCA TGGGCAAAGG CGAAGAGACG CTCAAGAAAA GCGATGAGCC TGCTCTGGAA CTGCCGCTCG AGAGCCTGGC CAAGGATGCG CTGGAGAGTC TCAAGGACAG CGTGCAACCC AATCGCCCGG ATCAGTTCGT CAGCAAGCTC AACGCCCTGA CCCAGGCGCT GAACCAGCAG ACCAACGTGA CCTCGCGCCT GCCACTGGTG CCCGGCCAGC CGGTGGCCAT GCATCAGGGG GGCTGGAGCG AAGCGGTGGT GGACCGGGTC ATGTGGTTGT CCAGTCAGAA CCTCAAGTCG GCGGAAATTC AGCTCGACCC GGCCGAGCTG GGGCGCCTGG AGGTGCGGGT GAACCTGTCC CAGGATCAGG CCCAGGTCAC CTTCGCCAGC CCCAACGCCA GCGTGCGCGA AGCGCTTGAA GGCCAGATGC ACCGCCTGCG CGAGCTGTTC ACCCAGCAGG GCATGAGCCT GGCCGACGCC AATGTCTCCG ACCAGTCGCT GAGCCGCGGC TGGCAGGGCC AGGGGGAGGA GGGTCGTGGT GGTGGACGTG GCGGCGAAGG GCTGCTGACC GGCGATGACG CAGCGATGGT CGGACATCAG GAAGTGGCCG GTGAGCGCCT GCGCACGGGG CTCGGCCTGG TCGATTACTA CGCCTGA
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Protein sequence | MSALPDLRLQ ATPEAKSKAK QPAKAPEPSK KEASSFAEVY AKERQAKPGE RSGSTAKSSQ EQPAKPGAEA STPAATAAEQ PVVAAPGNSL PAEEGTQEAL DPLLAMALGG MPLPADVVPA AEEALPPEAL LITGFAGDSA EETQPLLEPE VDDPLAMLAE LPEEEVKTQP VQEAVSRSAR ISTSTDFAAA MAAMGKGEET LKKSDEPALE LPLESLAKDA LESLKDSVQP NRPDQFVSKL NALTQALNQQ TNVTSRLPLV PGQPVAMHQG GWSEAVVDRV MWLSSQNLKS AEIQLDPAEL GRLEVRVNLS QDQAQVTFAS PNASVREALE GQMHRLRELF TQQGMSLADA NVSDQSLSRG WQGQGEEGRG GGRGGEGLLT GDDAAMVGHQ EVAGERLRTG LGLVDYYA
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