Gene Pmen_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2817 
Symbol 
ID5107613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3094129 
End bp3095355 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content67% 
IMG OID640504067 
Productflagellar hook-length control protein 
Protein accessionYP_001188304 
Protein GI146307839 
COG category[N] Cell motility 
COG ID[COG3144] Flagellar hook-length control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0900744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGT TGCCCGACCT ACGCCTGCAG GCCACGCCTG AGGCGAAGAG CAAAGCGAAG 
CAGCCGGCCA AAGCGCCGGA GCCCAGCAAG AAAGAGGCTT CCAGCTTTGC CGAGGTGTAT
GCCAAGGAGC GCCAGGCCAA GCCTGGTGAG CGCTCTGGCA GCACTGCAAA ATCCAGCCAG
GAGCAGCCGG CCAAGCCCGG TGCCGAGGCT TCGACCCCAG CCGCGACTGC CGCCGAACAA
CCGGTCGTTG CCGCCCCCGG CAATTCCTTG CCGGCCGAGG AGGGCACGCA GGAGGCGCTC
GATCCCTTGC TGGCCATGGC CCTTGGCGGC ATGCCGCTGC CGGCTGACGT AGTGCCTGCT
GCCGAGGAAG CGCTGCCGCC CGAGGCTCTG CTGATCACCG GCTTTGCCGG CGACAGCGCC
GAAGAGACAC AGCCGTTGCT GGAGCCTGAG GTCGATGACC CCCTGGCCAT GCTCGCCGAG
CTGCCGGAGG AGGAGGTCAA GACCCAGCCC GTGCAGGAGG CAGTGAGCAG AAGTGCGCGG
ATCTCCACCA GCACCGATTT CGCCGCGGCC ATGGCGGCCA TGGGCAAAGG CGAAGAGACG
CTCAAGAAAA GCGATGAGCC TGCTCTGGAA CTGCCGCTCG AGAGCCTGGC CAAGGATGCG
CTGGAGAGTC TCAAGGACAG CGTGCAACCC AATCGCCCGG ATCAGTTCGT CAGCAAGCTC
AACGCCCTGA CCCAGGCGCT GAACCAGCAG ACCAACGTGA CCTCGCGCCT GCCACTGGTG
CCCGGCCAGC CGGTGGCCAT GCATCAGGGG GGCTGGAGCG AAGCGGTGGT GGACCGGGTC
ATGTGGTTGT CCAGTCAGAA CCTCAAGTCG GCGGAAATTC AGCTCGACCC GGCCGAGCTG
GGGCGCCTGG AGGTGCGGGT GAACCTGTCC CAGGATCAGG CCCAGGTCAC CTTCGCCAGC
CCCAACGCCA GCGTGCGCGA AGCGCTTGAA GGCCAGATGC ACCGCCTGCG CGAGCTGTTC
ACCCAGCAGG GCATGAGCCT GGCCGACGCC AATGTCTCCG ACCAGTCGCT GAGCCGCGGC
TGGCAGGGCC AGGGGGAGGA GGGTCGTGGT GGTGGACGTG GCGGCGAAGG GCTGCTGACC
GGCGATGACG CAGCGATGGT CGGACATCAG GAAGTGGCCG GTGAGCGCCT GCGCACGGGG
CTCGGCCTGG TCGATTACTA CGCCTGA
 
Protein sequence
MSALPDLRLQ ATPEAKSKAK QPAKAPEPSK KEASSFAEVY AKERQAKPGE RSGSTAKSSQ 
EQPAKPGAEA STPAATAAEQ PVVAAPGNSL PAEEGTQEAL DPLLAMALGG MPLPADVVPA
AEEALPPEAL LITGFAGDSA EETQPLLEPE VDDPLAMLAE LPEEEVKTQP VQEAVSRSAR
ISTSTDFAAA MAAMGKGEET LKKSDEPALE LPLESLAKDA LESLKDSVQP NRPDQFVSKL
NALTQALNQQ TNVTSRLPLV PGQPVAMHQG GWSEAVVDRV MWLSSQNLKS AEIQLDPAEL
GRLEVRVNLS QDQAQVTFAS PNASVREALE GQMHRLRELF TQQGMSLADA NVSDQSLSRG
WQGQGEEGRG GGRGGEGLLT GDDAAMVGHQ EVAGERLRTG LGLVDYYA