| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2805 |
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| Symbol | fliA |
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| ID | 5107601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3083228 |
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| End bp | 3083974 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640504055 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001188292 |
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| Protein GI | 146307827 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.838536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.135389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGCAG CCTCTGGACT TCGTATGTAC AACAAGGCGC AGGCGCAGGA CTCCCAGCAC
CAGCTGATCG AACGCTATGC CCCTCTGGTC AAGCGCATTG CTTATCACCT GCTGGCCCGT
CTACCGGCCA GCGTGCAAGT CGACGATCTC ATTCAGGCCG GCATGATCGG CCTGCTGGAA
GCGTCGCGCA AATACGACTC CGGCAAGGGG GCGAGCTTCG AAACCTTCGC CGGTATCCGC
ATCCGCGGTG CCATGCTCGA CGAGGTACGC AAGGGCGACT GGGCCCCGCG TTCGGTGCAC
CGCAACAGCC GCATGGTCAG CGATGCCATT CGTGTCGTTG AAGCAAGAAC CGGGCGAGAC
GCTAAAGATC ACGAGGTTGC GGCCGAACTC CAATTGAGTC TCGAGGATTA CTACGGCATC
CTTGGCGACA CTTTGGGCAG CCGTTTGTTC AGCTTCGACG ACCTGTTGCA GGACGGCGAG
CATGGCGGTT TGCACGAAGA CGCCGGGCAC ACCCACCTCG AACCTTCGCG GGACCTCGAA
GACGAACGCT TCCAGGCGGC CTTGGCCGAT GCCATCGCCG GTTTGCCGGA GCGCGAACGT
CTCGTGCTGG CGCTGTATTA CGATGAAGAA CTGAACTTGA AGGAAATCGG CGAAGTGCTG
GGGGTCAGCG AGTCGCGCGT CAGCCAGTTG CATAGCCAGT GCGCGGCGCG GTTGCGCTCG
CGGCTAGGCG AGTGGCGCGC CAGCTGA
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| Protein sequence | MTAASGLRMY NKAQAQDSQH QLIERYAPLV KRIAYHLLAR LPASVQVDDL IQAGMIGLLE
ASRKYDSGKG ASFETFAGIR IRGAMLDEVR KGDWAPRSVH RNSRMVSDAI RVVEARTGRD
AKDHEVAAEL QLSLEDYYGI LGDTLGSRLF SFDDLLQDGE HGGLHEDAGH THLEPSRDLE
DERFQAALAD AIAGLPERER LVLALYYDEE LNLKEIGEVL GVSESRVSQL HSQCAARLRS
RLGEWRAS
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