| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2752 |
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| Symbol | |
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| ID | 5107548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3024940 |
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| End bp | 3027336 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504002 |
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| Product | xanthine oxidase |
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| Protein accession | YP_001188239 |
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| Protein GI | 146307774 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.988781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.624971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGTC ATATCGAACA CAAATCCCAG GAAGAGCTGG CCGCCCTGTT CCGCGCCGGC
ATGACCAGCG GCGTCGGCCG CAGCGTCAAG CACGAGAGCG CGGACAAGCA TGTCACCGGC
GAGGCGGTCT ATGTCGACGA CCGCCTGGAA TTCCCCAACC AGCTGCACGT CTATGCGCGT
CAGTCGGATC GCGCTCATGC GCGCATCCTG CGCATCGACA CCCGCCCCTG CTACGAGTTT
CCGGGCGTGG CCATCGCCAT CACCAAGAAT GACGTACCGG GCCAGCTGGA TATCGGCCCG
GTGGTCGCCG GTGACCCGCT GCTGGCCGAC GGCAAGGTCG AGTACGTTGG CCAGGTGGTG
CTGGCGGTGG CCGCCGACAG CCTGGAAACT GCGCGCAAGG CGGCCATGGC CGCCATCGTC
GAATACGAAG ACCTGGAGCC GGTGCTCGAC GTGGTCGAGG CCTACCGCAA AAAGCATTTC
GTGCTCGCCA GCCACACCCA CCGCATCGGC GACTCGGCCA GCAAACTGGC CAGCGCCCCA
CGTCGCCTGC AGGGCACCCT GCATATCGGC GGCCAGGAGC ACTTCTACCT GGAAACCCAG
ATTTCCTCGG TGATGCCCAC CGAAGACGGC GGCATGCTGG TCTACACCTC GACGCAGAAC
CCCACCGAGG TACAGAAGCT GGTGGCCGAA GTGCTCGGCG TGCCGATGAA CAAGATCGTC
ATCGACATGC GCCGCATGGG CGGCGGTTTT GGCGGCAAGG AAACCCAGGC CGCCGGCCCG
GCGTGCCTGT GTGCAGTGAT CGCGCACCTC ACCGGCCGGC CGACCAAGAT GCGTCTGCCG
CGCATGGAAG ACATGAGCAT GACCGGCAAG CGTCACCCCT TCTACGTCGA GTACGACGTC
GGCTTCGATG ACGACGGCCT GCTGCACGGC ATCGAGATGG ACCTGGCCGG CAACTGCGGC
TACTCGCCGG ACCTGTCCGG CTCCATCGTC GACCGCGCCA TGTTCCACTC GGACAACGCC
TACTTCCTCG GCAACGCCAC CATCAACGGT CATCGCTGCA AGACCAACAC CGCGTCGAAC
ACCGCCTACC GCGGTTTCGG CGGCCCGCAG GGCATGGTCG CCATCGAGGA AGTGATGGAC
GCCGTCGCGC GCCACCTCGG CAAGGACCCG CTGGAGGTAC GCAAACTCAA CTACTACGGT
AAGACCGAGC GCAACGTCAC CCACTACCAC CAGACCGTCG AGCACAACGT CATCCACGAG
ATGACCGCCG AGCTGGAGCA GAGCTGCGAG TACGCCAAGC GCCGTGAAGA AATCCGCGCC
TTCAACGCTA AGAGTCCTGT GTTGAAGAAA GGCCTGGCCA TGACCCCGGT GAAGTTCGGC
ATCAGCTTCA CCGCCACCTT CCTCAACCAG GCCGGCGCAC TGATCCACAT CTACACCGAC
GGTTCTATCC ACCTCAACCA CGGCGGCACC GAGATGGGCC AGGGCCTCAA CACCAAGGTG
GCCCAGGTCG TCGCCGAAGT GTTCCAGGTC GATATCGAGC GCATCCAGAT CACCGCCACC
AACACCGACA AGGTGCCCAA TACCTCGCCG ACCGCAGCCT CCAGCGGCGC CGACCTCAAC
GGCATGGCGG CGAAGAACGC GGCCGAAACC ATCAAGCAGC GCCTGGTGGA CTTCCTGGTG
CGCGAGTACA AGGTCACCCC GGAGGACGTC GAATTCCGCA ACGGGCAGGT GCGCGTGCGC
GACCACTTCC TGTCCTTCGA GGAGATGATC CAGAAGGCCT ACTTCGGTCA GGTCTCGCTG
TCCTCTACCG GCTTCTACCG CACACCGAAG ATCTACTACG ACCGCGACAA GGCGGCCGGC
CGCCCCTTCT ATTACTACGC CTACGGCGTG GCTTGCGTGG AAGTGCTGGT GGACACCCTG
ACCGGCGAAT ACCGCATGCT GCGCGGCGAC ATCCTGCATG ACGTCGGCGA CTCGCTTAAC
CCGGCCATCG ACATCGGCCA GGTCGAAGGT GCCTTCGTCC AGGGCATGGG CTGGCTGACC
ACCGAGGAGC TGGTGTGGAA CGCCAAGGGC AAGCTGATGA CCAACGGCCC GGCCAGCTAC
AAGATCCCGG CCATCGCCGA CATGCCCATC GACCTGCGCG TGAAGCTGGT GGAGAACCGC
AAGAACCCGG AAGACACCGT GTTCCACTCC AAGGCCGTGG GCGAGCCGCC CTTCATGCTC
GGCATCGCCG CCTGGTGCGC CCTGAAGGAC GCCGTAGCCA GCCTGGCCGA CTACAAGGTG
CAACCGCAGA TCGACGCCCC GGCCACGCCC GAGCGCGTGC TCTGGGGTGT GGAACAGATG
CGCAAGTTGA AGACGACGGC CAAGGCTGCC AGCGCTGCCG AGGTTGAACC GGCGTAA
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| Protein sequence | MSSHIEHKSQ EELAALFRAG MTSGVGRSVK HESADKHVTG EAVYVDDRLE FPNQLHVYAR
QSDRAHARIL RIDTRPCYEF PGVAIAITKN DVPGQLDIGP VVAGDPLLAD GKVEYVGQVV
LAVAADSLET ARKAAMAAIV EYEDLEPVLD VVEAYRKKHF VLASHTHRIG DSASKLASAP
RRLQGTLHIG GQEHFYLETQ ISSVMPTEDG GMLVYTSTQN PTEVQKLVAE VLGVPMNKIV
IDMRRMGGGF GGKETQAAGP ACLCAVIAHL TGRPTKMRLP RMEDMSMTGK RHPFYVEYDV
GFDDDGLLHG IEMDLAGNCG YSPDLSGSIV DRAMFHSDNA YFLGNATING HRCKTNTASN
TAYRGFGGPQ GMVAIEEVMD AVARHLGKDP LEVRKLNYYG KTERNVTHYH QTVEHNVIHE
MTAELEQSCE YAKRREEIRA FNAKSPVLKK GLAMTPVKFG ISFTATFLNQ AGALIHIYTD
GSIHLNHGGT EMGQGLNTKV AQVVAEVFQV DIERIQITAT NTDKVPNTSP TAASSGADLN
GMAAKNAAET IKQRLVDFLV REYKVTPEDV EFRNGQVRVR DHFLSFEEMI QKAYFGQVSL
SSTGFYRTPK IYYDRDKAAG RPFYYYAYGV ACVEVLVDTL TGEYRMLRGD ILHDVGDSLN
PAIDIGQVEG AFVQGMGWLT TEELVWNAKG KLMTNGPASY KIPAIADMPI DLRVKLVENR
KNPEDTVFHS KAVGEPPFML GIAAWCALKD AVASLADYKV QPQIDAPATP ERVLWGVEQM
RKLKTTAKAA SAAEVEPA
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