Gene Pmen_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2715 
Symbol 
ID5107866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2978063 
End bp2978947 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID640503959 
Productacetyl-CoA carboxylase subunit beta 
Protein accessionYP_001188202 
Protein GI146307737 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0885934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACT GGTTGGTAGA CAAACTCATT CCCTCGATCA TGCGTTCCGA GGTGAAGAAG 
AGCTCTGTGC CCGAGGGGCT GTGGCACAAG TGTCCGTCCT GCGATGCCGT GCTCTATCGT
CCCGAGCTGG AAAAGACCCT CGACGTCTGC CCCAAGTGCA ATCACCACAT GCGCATCGGT
GCCCGTGCGC GCCTGGATAT CTTCCTCGAC CAGGACGGCC GTGAAGAGAT CGGCGCCGAT
CTCGAGCCGG TCGATCGCCT GAAGTTCCGT GACAGCAAGA AGTACAAGGA CCGTCTGGCT
GCCGCGCAGA AGCAGACCGG CGAGAAGGAC GCGCTGATCG CCATGAGCGG TACCCTCGAA
GGCATGCCGA TCGCCGTTTG CGCCTTCGAA TTCTCCTTCA TGGGCGGCTC CATGGGCGCC
ATCGTTGGTG AGCGTTTCGT CCAGGCGGCC AACGTTGCGC TGGAGCAGCG CTGCCCGCTG
GTGTGCTTCT CCGCTTCCGG TGGCGCGCGC ATGCAGGAGG CGCTGATCTC GCTGATGCAG
ATGGCCAAGA CCTCGGCCGC CCTGGCGCGT CTGCGCGAGG AAGGGCTGCC TTTCATCTCC
GTGCTGACCG ACCCGGTCTA CGGCGGCGTT TCCGCCAGCC TGGCGATGCT CGGCGATGTG
ATCGTGGCCG AGCCGAAGGC ACTGATCGGC TTCGCCGGCC CGCGCGTGAT CGAGCAGACC
GTGCGCGAGA AGCTGCCGGA AGGCTTCCAG CGCAGCGAGT TCCTGCTCGA GCACGGCGCC
ATCGACATGA TCATCCCGCG TAACGAACTG CGTCCGCGTT TGGCGCGCCT GCTGGCGCAG
CTGATGAATC GCCCGTCTCC GGTCGCCCTG CCGGTCACTG CATGA
 
Protein sequence
MSNWLVDKLI PSIMRSEVKK SSVPEGLWHK CPSCDAVLYR PELEKTLDVC PKCNHHMRIG 
ARARLDIFLD QDGREEIGAD LEPVDRLKFR DSKKYKDRLA AAQKQTGEKD ALIAMSGTLE
GMPIAVCAFE FSFMGGSMGA IVGERFVQAA NVALEQRCPL VCFSASGGAR MQEALISLMQ
MAKTSAALAR LREEGLPFIS VLTDPVYGGV SASLAMLGDV IVAEPKALIG FAGPRVIEQT
VREKLPEGFQ RSEFLLEHGA IDMIIPRNEL RPRLARLLAQ LMNRPSPVAL PVTA