Gene Pmen_2714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2714 
Symbol 
ID5107865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2976789 
End bp2978066 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content67% 
IMG OID640503958 
ProductFolC bifunctional protein 
Protein accessionYP_001188201 
Protein GI146307736 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.20841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0950332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC GTAGCCTGGG CGAGTGGCTC GCCTACCTCG AGCAGTTGCA TCCCTCTGCC 
ATCGACATGG GGTTGGAGCG CTCGCGCGAG GTGGCGCAGC GCCTCGGCCT GGGCAAGCCG
GCGCCGCTGG TCATCACGGT TACCGGCACC AACGGCAAGG GCTCTACCTG TGCCTTTCTT
GCCAGCCTGC TGCGCTCGCA GGGGCGCAAG GTTGGCGTTT ACAGCTCGCC GCATCTGCTG
CGCTACAACG AGCGCGTGGT CATCGATGGC CGCGAAGTCG ACGATGCCGA GCTGTGCCAG
GCCTTCGCCG CGGTGGAAGC GGCGCGCGGC GAAACGTCCC TGACCTATTT CGAGATGGGC
ACCCTGGCTG CTTTCTGGCT GTTCGAGCGC GCGGCCCTGG ATGCCGTGGT GCTGGAGGTC
GGTCTGGGCG GGCGACTGGA TGCGGTCAAT CTGGTGGATG CCGACCTGGC GCTGATCACC
AGTATCGGTC TGGATCATGC CGATTGGCTG GGCGATACCC GCGAGTCGGT GGCCTTCGAG
AAGGCTGGCA TCATGCGCGC GGGCAAGCCG GCGCTGTGTG GTGATCTCGA CCCGCCGCAG
CCACTGCTCG AGCAGGTCGC GTTGCTGGAT GCACCATTCT TCCTGCGCGG GCGCGACTAC
GACCTGAGCA TTCAGGGGCA GCAGTGGTCC TGGTATGGCC TGGATGCCCA TGGCCAGGTG
TTGCAGCTGG AGCAGCTACC GCTGCTCGAT CTGCCGATGG AGAACGCTGC GCTGTCCTTG
CAGGCTTACG CACTGTTGCA GTTGCCCTGG GATCGTCAGC AGATCGTTCA GGCGCTGCTG
GCGACGCGAG TGACCGGGCG TCTGGATCGT CGCGCTCTGG ATTGGCGAGG CAAGTCACTC
ACACTGTTGC TCGATGTTGG GCATAATCCC CATGCCGCCG ACTATCTGGC GCAGCGTCTG
GAGGCGCGTC CTCCGGCCGG GAAGCGTTGG GCCGTGTTCG GCTTGCTGGC CGACAAGGAC
CTGCCTGGAG TGGTCGCGCC ACTGTTGAGT CAGGTTGCCG GCTGGGCCGT GGCGCCGCTG
GCAACGCCTC GTTCGCGGCC GGCCGGCGAG CTGGCCGCGC ATCTGCAGAG TTACGGCGCG
GCAGTGACGC AGCATGCTGG CGTGCGGGCA GCGCTGGAGG CCCAGTGCGA GCAGGCCGCG
GCGGGTGACG AGATTCTGTT GTTCGGATCG TTTTTTTGCG TGGCCGAGGC CCTGGACTGG
CTGGCCCGCC CAGCTTGA
 
Protein sequence
MTTRSLGEWL AYLEQLHPSA IDMGLERSRE VAQRLGLGKP APLVITVTGT NGKGSTCAFL 
ASLLRSQGRK VGVYSSPHLL RYNERVVIDG REVDDAELCQ AFAAVEAARG ETSLTYFEMG
TLAAFWLFER AALDAVVLEV GLGGRLDAVN LVDADLALIT SIGLDHADWL GDTRESVAFE
KAGIMRAGKP ALCGDLDPPQ PLLEQVALLD APFFLRGRDY DLSIQGQQWS WYGLDAHGQV
LQLEQLPLLD LPMENAALSL QAYALLQLPW DRQQIVQALL ATRVTGRLDR RALDWRGKSL
TLLLDVGHNP HAADYLAQRL EARPPAGKRW AVFGLLADKD LPGVVAPLLS QVAGWAVAPL
ATPRSRPAGE LAAHLQSYGA AVTQHAGVRA ALEAQCEQAA AGDEILLFGS FFCVAEALDW
LARPA