| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2711 |
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| Symbol | |
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| ID | 5107862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2973691 |
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| End bp | 2975199 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640503955 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_001188198 |
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| Protein GI | 146307733 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.966551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.266296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGCA TCGTCGGTAT CGTCGGCAAG TCGAACGTCA ATCAGGCGCT GTATGACGCG
CTCACCGTCC TTCAGCATCG CGGCCAGGAC GCTGCCGGCA TCGTCACCAG CCATGACGGC
CGGCTATTCC TGCGCAAGGA CAACGGCCTG GTGCGCGATG TGTTCCAGCA GCGCCACATG
CAGCGCCTGG TGGGCAACAT GGGCATCGGT CACGTGCGCT ATCCCACCGC TGGCAGCTCC
AGCTCGGCCG AAGCCCAGCC GTTTTACGTC AACTCGCCGT ACGGCATCAC CTTGGCGCAC
AACGGCAACC TGACCAACGT CGAGCGCCTG GCCAAGGAAA TCTACGAGTC CGACCTGCGT
CACGTGAACA CCAACTCCGA CTCGGAGGTG CTGCTCAACG TGTTCGCCCA CGAGCTGGCC
CAGCGCGGCA AGCTGCAGCC CACCGAGGAA GACGTGTTCG CCGCGGTCGC CCATGTGCAC
GAACGCTGCC TGGGCGGTTA TGCGGTGGTG GCGATGATCA CCGGTTACGG TATCGTCGGC
TTCCGCGATC CCAACGGCAT TCGCCCGATC GTCTTCGGTC AGCGCCACAC CGACGAAGGC
GTGGAGTACA TGATCGCTTC GGAGAGCGTG TCGCTGGACG TGCTCGGCTT CACCCTGATC
CGCGACCTGG CGCCGGGTGA GGCGGTTTAC ATCACCGAGG AAGGCAAGCT GTTCACCCGT
CAGTGCGCAC AGAACCCCAA GTACGCGCCG TGCATCTTCG AGCATGTCTA CCTGGCGCGT
CCGGACTCGA TCATGGACGG TATCTCGGTG TACAAGGCGC GCCTGCGCAT GGGCGAGAAG
CTGGCCGACA AGATCCAGCG CGAGCGTCCG GATCACGACA TCGACGTGGT CATCCCGATT
CCCGATACCA GCCGTACCGC CGCGCTGGAG CTGGCCAACC GCCTGGGCGT GAAGTTCCGC
GAAGGCTTCG TCAAGAACCG CTACATCGGT CGTACCTTCA TCATGCCCGG CCAGGCGGCG
CGCAAGAAAT CCGTACGGCA GAAGCTCAAC GCCATCGAGC TGGAGTTCCG TGGCAAGAAC
GTGATGCTGG TGGACGACTC CATCGTGCGC GGCACCACCT GCAAGCAGAT CATCCAGATG
GCTCGCGAAG CCGGGGCGAA GAACGTCTAC TTCTGCTCCG CGGCACCGGC GGTGCGCTAC
CCCAACGTCT ACGGCATCGA CATGCCCAGC GCCCACGAGC TGATCGCCCA TGGCCGCAGC
ACCGAGGAAG TCTGCGAACT GATCGGTGCC GACTGGCTGG TGTACCAGGA TCTGCCGGAT
CTGATCGAGG CGGTCAGTGG CAGCAAGAAG ATCAAGATCG ACAACTTCGA CTGCGCGGTA
TTCGACGGCA AATACGTCAC CGGAGACGTC GACGAGGCCT ATCTGGACAA GATCGAGCAG
GCGCGCAATG ACGCCAGCAA GGCCAAGTCG CAGGCGGTCA GCGCGATCAT CGATCTGTAC
AACAATTGA
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| Protein sequence | MCGIVGIVGK SNVNQALYDA LTVLQHRGQD AAGIVTSHDG RLFLRKDNGL VRDVFQQRHM
QRLVGNMGIG HVRYPTAGSS SSAEAQPFYV NSPYGITLAH NGNLTNVERL AKEIYESDLR
HVNTNSDSEV LLNVFAHELA QRGKLQPTEE DVFAAVAHVH ERCLGGYAVV AMITGYGIVG
FRDPNGIRPI VFGQRHTDEG VEYMIASESV SLDVLGFTLI RDLAPGEAVY ITEEGKLFTR
QCAQNPKYAP CIFEHVYLAR PDSIMDGISV YKARLRMGEK LADKIQRERP DHDIDVVIPI
PDTSRTAALE LANRLGVKFR EGFVKNRYIG RTFIMPGQAA RKKSVRQKLN AIELEFRGKN
VMLVDDSIVR GTTCKQIIQM AREAGAKNVY FCSAAPAVRY PNVYGIDMPS AHELIAHGRS
TEEVCELIGA DWLVYQDLPD LIEAVSGSKK IKIDNFDCAV FDGKYVTGDV DEAYLDKIEQ
ARNDASKAKS QAVSAIIDLY NN
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