| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2694 |
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| Symbol | |
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| ID | 5107845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2954349 |
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| End bp | 2956334 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503938 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_001188181 |
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| Protein GI | 146307716 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.250479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.322946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAT TCAACAAGAT CCTGATCGCC AACCGTGGCG AGATCGCCTG TCGGGTGATG
CGCACCGCCA TCGAGCTCGG CTATCGCACC GTGGCGGTGT ACTCCGAGGC CGATGCCGAT
GCCCGCCATG TACAGATCGC CGACGAAGCC GTATGCATCG GCCCGGCTCA GGTCAGCCAG
TCCTACCTGC GCATCGACGC CATCATCGAG GCCGCGCGCA AGACCGGTGC CGACGCCATC
CACCCCGGCT ATGGCTTCCT CTCCGAGAAC GCCGACTTCG CCCGCGCCTG CGAGGCGGCC
GGAATCGTCT TTATCGGCCC GACCGTAGAC GCCATCCACC TGATGGGCAG CAAGCGCCTG
TCCAAGATCG CCATGCTGGA GGCCGGCGTG CCCTGCATCC CCGGCTATGA AGGCGCCGCC
CAGGATGACG AGACCCTGGC CAGCGAAGCC GAACGCATCG GCTACCCGCT GATGATCAAG
GCCAGCGCCG GCGGTGGCGG CCGCGGCATG CGCCTGGTAC AGGAATCCTC CGAACTGCTG
GGACAGATCC GCACCGCCCG CTCGGAGGCG CAGAACGCCT TCGGCTCCGG CGAGCTGATC
CTCGAGCGCG CGGTGATCCG CCCGCGCCAT GTGGAGATCC AGGTGTTCGG CGACCAACAC
GGCAATATCC TCTACCTCGG CGAGCGCGAC TGCTCGGTGC AGCGTCGCCA CCAGAAGGTG
GTCGAGGAAG CGCCCTGCCC AGTGATGACG CCCGAGCTGC GCCGCGCCAT GGGCGAGGCC
GCGGTGAAGG CGGCCGCCTC GGTCAATTAC GTCGGCGCCG GCACCGTGGA ATTCCTGCTC
GATGCCAGCG GCGAATTCTT CTTCCTGGAA ATGAACACCC GCCTGCAGGT GGAGCACCCG
GTCACCGAGC TGATCACCGG CCAAGATCTG GTGGCCTGGC AGATACGCGT CGCCGAGGGC
CAGCCCCTGC CACTGCAGCA GGACGAAATC CGCCTCACCG GCCATGCCAT GGAGGTGCGC
CTGTACGCCG AGGATTCGGC CGCCGGCTTC CTGCCGCAAA CCGGCCAGGT GCTGCGCTGG
GAACCCGAAT TGTTGGCTGG CGTGCGCATC GACCACGGCC TGGTCGAGGG CCAGGCCGTC
ACCCCCTTCT ACGACCCGAT GCTGGCCAAG GTCATCGCCT ACGGCGCAAC CCGCGACGAA
GCCCGGCGCA AGCTGGTGCG CGCGGTCGAG CAGTGCGTGC TGCTCGGCGT GAACGGCAAC
CAGCGCTTTC TCGCCAACCT GCTCAAGCAC CCGGAGTTCG CCGCCGGCAA CGCCACCACG
GCGTTCATCG CCGAACACTT CGCTGATGAC CCCAGCCTGC AGCCGCATAC CGCCAGCCTG
GCCGAGCTGG CCATGGCCGC CGCCCTGCTC TACCAGGCTT CGGCCGAGGC TCGCGCGCAC
CAGCCCGGCC TGTCCGGCTG GCGCAGCGCC GGCAGCGCGC CCTGGCGCTT CGTCCTCAAG
CAGGGCGAGC ACAAGCACGC CGTGGAGCTG GACGTACTCG CCAGCGGCCC GCAAGCGCAG
CTGCGCGTGC GCCGCGGTGA AGAACAGTTG CCTGTGCGCC TGCTGGCCAG TGACGGCCGC
TGGCTGAGCC TGGAGCTGGA CGGTGTGCGC CGCCGCCAGG CCTACCACCT CGAAGGCGAG
CGCCTGTGGC TGTACGGTGA ACACGGCAAC CTGGAACTGC TGGATGTCAC CCACGAGCCG
GCCGGCGGGC AGAACGCCGC CAGCAGCGGC GCGGTGAAGG CACCGATGGA TGGTGCCATC
GTCGAGGTGC TGATCGCTGA GGGCGCCAGC GTCAGCAAGG GGCAACTGCT GGTGGTGCTG
GAAGCGATGA AGATGGAGCA CCCGCTCAAG GCCGGCGTCG ACGGCATCGT CCGCCGCGTT
GGCGTGAGCC AGGGCGACCA GGTGAAGAAC CGTCAGTTGC TGGTGGAAAT CGAAGCTGAT
TCGTAG
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| Protein sequence | MPAFNKILIA NRGEIACRVM RTAIELGYRT VAVYSEADAD ARHVQIADEA VCIGPAQVSQ
SYLRIDAIIE AARKTGADAI HPGYGFLSEN ADFARACEAA GIVFIGPTVD AIHLMGSKRL
SKIAMLEAGV PCIPGYEGAA QDDETLASEA ERIGYPLMIK ASAGGGGRGM RLVQESSELL
GQIRTARSEA QNAFGSGELI LERAVIRPRH VEIQVFGDQH GNILYLGERD CSVQRRHQKV
VEEAPCPVMT PELRRAMGEA AVKAAASVNY VGAGTVEFLL DASGEFFFLE MNTRLQVEHP
VTELITGQDL VAWQIRVAEG QPLPLQQDEI RLTGHAMEVR LYAEDSAAGF LPQTGQVLRW
EPELLAGVRI DHGLVEGQAV TPFYDPMLAK VIAYGATRDE ARRKLVRAVE QCVLLGVNGN
QRFLANLLKH PEFAAGNATT AFIAEHFADD PSLQPHTASL AELAMAAALL YQASAEARAH
QPGLSGWRSA GSAPWRFVLK QGEHKHAVEL DVLASGPQAQ LRVRRGEEQL PVRLLASDGR
WLSLELDGVR RRQAYHLEGE RLWLYGEHGN LELLDVTHEP AGGQNAASSG AVKAPMDGAI
VEVLIAEGAS VSKGQLLVVL EAMKMEHPLK AGVDGIVRRV GVSQGDQVKN RQLLVEIEAD
S
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