| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2675 |
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| Symbol | |
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| ID | 5107826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2933703 |
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| End bp | 2936111 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503919 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001188162 |
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| Protein GI | 146307697 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCA CCGCCGCTCC CTTCCGCCGC ACTCTGCTGG CGCTGACCAT CGCCTTCGCC
GGCCAGGTGG GGCTGGCTCA TGCCGAGCCC TATCAGCTGC CCGCCGGCCC CCTGGCCGCC
ACGCTCAACC AGATCGCCAG CCAGGCCGGC GTGACCCTGA GCATCGACCC GGCGCTGACC
GAGGGCAAAC GCTCGGCGCC GGTGGAAGGT GATCTGCAAG CCGTCGACGC GCTCAACCAG
GCCCTGCGCG GCACCGGTCT GCAACTGCAG AGCAACGGCG CTGGCGTCTA CAGCCTGGTA
CCTGCCGCCG AATCGGCGGT GGCGCTGCCC GACGTGACCG TTACCGCCAG CGAACAGGCC
GCCGAAACGG CCTGGGGCCC GACCCGCGGC TACCTTGCCA GCCGCACGGC AACCGGCACC
AAGACCGACA CGCCGCTTCT GGAGACGCCA CGCTCCATCT CGGTTGCCAC CCGTGAGCAG
ATGCAGGATC GCAAGGTGCA GAACCTGGAC GATGCCGTGC GCTACATGCC CGGCGTGATC
GCCAGCAGCT ACGGCAGCGA CAGCCGCGCC GACTGGATGA AGATCCGCGG CTTCGAACCG
ATTCAGCTGC TCGACGGCCT GCCACTGCCC AAGGGCAGCT ACACCATGCC CAAACTGGAG
ACCTGGAACC TGGAGCGCGT CGCCGTGCTG CGCGGCCCGG CCTCCTCGGT CTATGGCCAG
ACCCCGCCCG GCGGCCTGGT TGACGCCGTC AGCCGTCGCC CACAGGCCGA AAGCAGCCAT
GAAGTGCAGG TGCAAGTCGG TAACTACCAG CACAAGCAGA TCAGCTTCGA CAGCACCGGC
AAGATCGATG ACGAGGGCCG TTTTCTCTAC CGGTTCAGTG GCGTGGGTCG TGACAGCGGC
ACGGTCATCG AGCATATGGA TGACCAGCGC TTCAACCTGG CGCCCAGCCT GACCTGGAAC
ATAGCAGGCG ACACCAGGCT GACGTTCCTC GGCCAGTTCA ATCGCGACGA TACCGGCGGC
ACCAGCCAGT TCCTGCCTCT GCAAGGCACC AAGCTGGGCA CGCCGGCCGG CAAGATCGAC
TACAACAAGA ACCTCGGCGA CCCCGACTGG GAGTTCTACG ACAAGACCTT CTATGCCCTC
GGCTACGCCT TCGAGCATCG CATCAACGAT GTCTGGCAGT TCAATCAGAA CCTTCGCTAC
AGCAAGCTCG AGCTGGATAA CCAGATCATC ACGGCTGGGG GTTGGGCTAC CGCGGTCGCT
AACGACGGCA CGGTTGCGCG CGGCGCCAAC GTGTACGACG AGAACATCAG CCACTTCGCC
ATGGACAACA ATTTCCAGGC TGACTTCCGT ACGGGCGCGC TGACCCATAC CTTGCTGCTG
GGCGTGGATT ATCTGCGCGT CAACACCGAT TACCGCTGGC TGTATGGCAG CGCCCCGAGC
AGCAATATCA TCAACCCGAT CTATGGCCAG GACTTCAGTG GTGTCGCCTA CACCGCCTTC
CAGGACTACA ACCAGAAGCG CAGGAACGCA GGCCTCTACC TGCAGGATCA GATCGCCCTC
GACGCCTGGC GCCTGACCCT GGGTGGCCGC TGGGATCGGC TGGATACCGA CTCGGTGTTC
TACAACGCCA ATGACGCCAA GGACAGCCGC CGCGACAGCC AGTTCAGCGG CAACGCCGCG
CTGAGCTACG TCTTCGACTC CGGCTTCACA CCCTACCTGT CCTACGCCGA ATCCTTCCAG
GCCGAAGCGG GCGGCAATGG CGGCGCCGCG TTCAAACCCA GTACCGGCAA GCAGTACGAG
CTGGGCATCA AGTACCAACC GCCTGGCAGC GACATGCTGT TCACCGCCGC GGTCTATGAC
CTGAAGCGGC AGAACATCGT GACCACCAAT ATCGCCGGCG CCAGCGAACC GGTGAGCGAG
GTAGAGGTAC GCGGCCTGGA ACTGGAGGCC ACCGGCAACC TCACCGAGAA CCTCAGCCTG
ACGGCCTCCT ACACTTACAC CAACAGCAAG ATGACCAAGG TTGGCGACCC GCGCGACAAG
AACCGCGCCC TGCCTCTCAC GCCGGAACAC CAGGCTTCGA TCTGGGCCGA CTATGACTGG
AATCAGGGCA TGCTGGCCGG ATTCGGCGTT GGCTTCGGCG CCCGCTTCGT CGGCTCCACC
GACAACATCG CCGTCGGCAA CCTGGGTTTC GTGCGGGATG CCTCCGACGG CCACAGCAGC
GCCTACACCG TCTACGACGC TGCCGTGCGC TACGACCTCG GTCAGCTCGA TGCCAGCCTG
CGTGGTGCCA GCGTATCGCT CAACGCCAAC AACCTGTTCG ACAAGGAATA CCTGGCCACC
TGCGACGGCT TCTACTGCTA TGCCGGCGAC CCGCGCCGGG TCACCGCGAG CATCGACTAC
AAGTGGTGA
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| Protein sequence | MSSTAAPFRR TLLALTIAFA GQVGLAHAEP YQLPAGPLAA TLNQIASQAG VTLSIDPALT
EGKRSAPVEG DLQAVDALNQ ALRGTGLQLQ SNGAGVYSLV PAAESAVALP DVTVTASEQA
AETAWGPTRG YLASRTATGT KTDTPLLETP RSISVATREQ MQDRKVQNLD DAVRYMPGVI
ASSYGSDSRA DWMKIRGFEP IQLLDGLPLP KGSYTMPKLE TWNLERVAVL RGPASSVYGQ
TPPGGLVDAV SRRPQAESSH EVQVQVGNYQ HKQISFDSTG KIDDEGRFLY RFSGVGRDSG
TVIEHMDDQR FNLAPSLTWN IAGDTRLTFL GQFNRDDTGG TSQFLPLQGT KLGTPAGKID
YNKNLGDPDW EFYDKTFYAL GYAFEHRIND VWQFNQNLRY SKLELDNQII TAGGWATAVA
NDGTVARGAN VYDENISHFA MDNNFQADFR TGALTHTLLL GVDYLRVNTD YRWLYGSAPS
SNIINPIYGQ DFSGVAYTAF QDYNQKRRNA GLYLQDQIAL DAWRLTLGGR WDRLDTDSVF
YNANDAKDSR RDSQFSGNAA LSYVFDSGFT PYLSYAESFQ AEAGGNGGAA FKPSTGKQYE
LGIKYQPPGS DMLFTAAVYD LKRQNIVTTN IAGASEPVSE VEVRGLELEA TGNLTENLSL
TASYTYTNSK MTKVGDPRDK NRALPLTPEH QASIWADYDW NQGMLAGFGV GFGARFVGST
DNIAVGNLGF VRDASDGHSS AYTVYDAAVR YDLGQLDASL RGASVSLNAN NLFDKEYLAT
CDGFYCYAGD PRRVTASIDY KW
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