Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2645 |
Symbol | recR |
ID | 5107954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2901560 |
End bp | 2902159 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640503888 |
Product | recombination protein RecR |
Protein accession | YP_001188132 |
Protein GI | 146307667 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.140151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCA GCCCCCTGAT TCGCCAGTTG ATCGACTCCC TGCGCATCCT GCCCGGTGTC GGGCAGAAGA CGGCGCAGCG CATGGCGCTG CAGCTGCTCG AGCGTGATCG CAGCGGCGGT CAGCGCCTGG CGCAGGCGCT CAATGCGGCG ATGGAAGGTG TGGGGCACTG CAAGCGCTGC CGCAGCCTGA GCGAGGACGA GGTCTGTCAG CTGTGCCTGG ACGAGCGTCG CGACGACAGC CTGCTGTGCG TGGTCGAGGG GCCGATGGAT GTGCATGCCG TGGAGCAGAC CGGCTTTCGC GGCCGTTACT TCGTGCTCAA GGGGCACCTG TCGCCACTCG ATGGCCTCGG TCCCGAGGCC ATCGGCATTC CCGAGCTGTT GGAGCGGATC GAGGCCGGTG CCTTCAGCGA GGTGATCCTC GCCACCAACC CGACGGTAGA GGGCGAGGCC ACGGCGCACT ACATTGCGCA GATCCTCGCC GGCAAGGGCC TGATCGCTTC GCGCATCGCC CATGGCATGC CGCTGGGGGG CGAACTGGAG CTGGTCGATG GCGGCACTCT GGCGCATGCC CTGGCCGGTC GGCGTCCGAT CAGTCTGTAA
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Protein sequence | MSFSPLIRQL IDSLRILPGV GQKTAQRMAL QLLERDRSGG QRLAQALNAA MEGVGHCKRC RSLSEDEVCQ LCLDERRDDS LLCVVEGPMD VHAVEQTGFR GRYFVLKGHL SPLDGLGPEA IGIPELLERI EAGAFSEVIL ATNPTVEGEA TAHYIAQILA GKGLIASRIA HGMPLGGELE LVDGGTLAHA LAGRRPISL
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