Gene Pmen_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2645 
SymbolrecR 
ID5107954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2901560 
End bp2902159 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content68% 
IMG OID640503888 
Productrecombination protein RecR 
Protein accessionYP_001188132 
Protein GI146307667 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.140151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCA GCCCCCTGAT TCGCCAGTTG ATCGACTCCC TGCGCATCCT GCCCGGTGTC 
GGGCAGAAGA CGGCGCAGCG CATGGCGCTG CAGCTGCTCG AGCGTGATCG CAGCGGCGGT
CAGCGCCTGG CGCAGGCGCT CAATGCGGCG ATGGAAGGTG TGGGGCACTG CAAGCGCTGC
CGCAGCCTGA GCGAGGACGA GGTCTGTCAG CTGTGCCTGG ACGAGCGTCG CGACGACAGC
CTGCTGTGCG TGGTCGAGGG GCCGATGGAT GTGCATGCCG TGGAGCAGAC CGGCTTTCGC
GGCCGTTACT TCGTGCTCAA GGGGCACCTG TCGCCACTCG ATGGCCTCGG TCCCGAGGCC
ATCGGCATTC CCGAGCTGTT GGAGCGGATC GAGGCCGGTG CCTTCAGCGA GGTGATCCTC
GCCACCAACC CGACGGTAGA GGGCGAGGCC ACGGCGCACT ACATTGCGCA GATCCTCGCC
GGCAAGGGCC TGATCGCTTC GCGCATCGCC CATGGCATGC CGCTGGGGGG CGAACTGGAG
CTGGTCGATG GCGGCACTCT GGCGCATGCC CTGGCCGGTC GGCGTCCGAT CAGTCTGTAA
 
Protein sequence
MSFSPLIRQL IDSLRILPGV GQKTAQRMAL QLLERDRSGG QRLAQALNAA MEGVGHCKRC 
RSLSEDEVCQ LCLDERRDDS LLCVVEGPMD VHAVEQTGFR GRYFVLKGHL SPLDGLGPEA
IGIPELLERI EAGAFSEVIL ATNPTVEGEA TAHYIAQILA GKGLIASRIA HGMPLGGELE
LVDGGTLAHA LAGRRPISL