| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2641 |
|---|
| Symbol | ftrA |
|---|
| ID | 5107950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2898961 |
|---|
| End bp | 2899929 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640503884 |
|---|
| Product | transcriptional activator FtrA |
|---|
| Protein accession | YP_001188128 |
|---|
| Protein GI | 146307663 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGACG ATCCCGGCCT AGTGGCCATC CTGGCATACG ATGGCCTCTG CACCTTCGAG
TTCGGCATTG CCGTGGAGAT CTTCGGTCTC CCCCGGCCCG AGTTCGATTT CCCCTGGTAC
CGCCATTGCA TTGTTGGCCT GGACAACGGC CCCATGCGCG CCATGGGCGG TATCCAGATA
CTCGCCGAGG CAGGACTGGA GCGCCTGGCC GAGGCGCGCA CCATTGTCAT CCCCGGCTGG
CGTGACCGCG CCGAGGTTCC CCCCGAGCCT TTGTTGTCCG CCCTGCGCGA CGCTCATGGA
CGTGGCGCTC GGCTGGTTTC CATCTGTTCT GGCGTTTTCG TCCTGGCTGC CAGCGGCTTG
CTGGACGGTC GACGCGCTAC TACCCACTGG CGCTATGCCG AGGAGCTAGC GCGTCGTTTC
CCCGCTGTCG AGGTGGATCC AGACGTGCTT TATGTCGATG CCGGCTCGCT CATCAGCTCG
GCTGGTAGTG CCGCCGGTAT CGATGCCTGC CTGCACCTGG TGGCGCGAGA CTTCGGTACC
CAGGTTGCCA ACACCGTAGC CCGGCGCCTG GTGATGTCGC CTCAGCGGGC CGGTGGCCAG
GCACAGTTCA TTCCGGCCCC GGTGGCCCGG GCGCCGCGCA GCGACCTCTC CACCCTGATG
CAGTGGGCGC GGCAGCACTT GCATGAGCCC CTGGAAGTGA GCCAGCTGGC ACGTCGCGCT
GCCATGAGCG AGCGCACCTT CCTGCGCCGT TTCAGTGAGG CCACAGGCAT GACGCCCAAG
GCCTGGCTGC AGCACGAGCG CCTGGCACGT GCCCGTGAAC TGTTGGAGAG CGGCACGGAT
GGCAGTGAGC GCATCGCTGA GCTGTGCGGT TTTCGCTCGG TGGAGAGTTT CCGTGTGGCC
TTTCGCAACG CTGTCGGGCT ACCGCCTTCG GCTTACCGCG AGCGTTTCGG TGTGACGCAC
GCATTCTGA
|
|---|
| Protein sequence | MHDDPGLVAI LAYDGLCTFE FGIAVEIFGL PRPEFDFPWY RHCIVGLDNG PMRAMGGIQI
LAEAGLERLA EARTIVIPGW RDRAEVPPEP LLSALRDAHG RGARLVSICS GVFVLAASGL
LDGRRATTHW RYAEELARRF PAVEVDPDVL YVDAGSLISS AGSAAGIDAC LHLVARDFGT
QVANTVARRL VMSPQRAGGQ AQFIPAPVAR APRSDLSTLM QWARQHLHEP LEVSQLARRA
AMSERTFLRR FSEATGMTPK AWLQHERLAR ARELLESGTD GSERIAELCG FRSVESFRVA
FRNAVGLPPS AYRERFGVTH AF
|
|---|
| |