Gene Pmen_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2612 
Symbol 
ID5107922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2874801 
End bp2875484 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID640503856 
Producthypothetical protein 
Protein accessionYP_001188100 
Protein GI146307635 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.471108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.594742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAC TGACGCCCTT GCTGGTGTCG GCACTGATTC TCGGCCTTCT CGGTGGCGGC 
CACTGCCTGG GCATGTGCGG CGGCCTGATG GGCGCGCTGA CCCTGGCCAT CCCTCCCGAA
CAGCGCGGCA GGCGCCTGCA GCTGCTGCTG GCCTACAACC TCGGGCGCAT TTTCAGTTAC
AGCCTGGCCG GCCTGCTTCT GGGATTGGCC GGTTGGGCCG TTGCTGGCAG CAAGGCCGAG
GTGATCATGC GCACCCTGGC AGCGCTGCTG CTGATCGCCA TGGGTCTGTA CCTGGCCGGC
TGGTGGAGTG GCCTGACCCG TATCGAGGCG CTGGGCCGCG GCCTGTGGCG CCACACTCAA
CCGCTGACCC GACGCTTTAT GCCGGTCACC AGCCTGCCAC GCGCCCTGGT GCTGGGCGGG
CTATGGGGCT GGCTGCCGTG CGGGCTGGTC TACAGCACCC TGCTGTGGGC CTCCAGCCAG
GGCAACGCGG TGGATAGCGC CCTGCTGATG CTGGCCTTCG GCCTGGGCAC CTGGCCGGTG
CTGCTCGCCA CCGGGCTGGC TGCCGAGCGC CTCACCGCCC TGCTGCGCAA ACGCGGCGTG
CGCATGGCAG GCGGCCTGCT GGTCATCCTG TTCGGCATCT GGACCCTGCC CGGCCCGCAT
CAGCACTGGC TGATGGGGCA CTGA
 
Protein sequence
MLELTPLLVS ALILGLLGGG HCLGMCGGLM GALTLAIPPE QRGRRLQLLL AYNLGRIFSY 
SLAGLLLGLA GWAVAGSKAE VIMRTLAALL LIAMGLYLAG WWSGLTRIEA LGRGLWRHTQ
PLTRRFMPVT SLPRALVLGG LWGWLPCGLV YSTLLWASSQ GNAVDSALLM LAFGLGTWPV
LLATGLAAER LTALLRKRGV RMAGGLLVIL FGIWTLPGPH QHWLMGH