Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2574 |
Symbol | |
ID | 5108041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2838477 |
End bp | 2839205 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640503818 |
Product | UDP-2,3-diacylglucosamine hydrolase |
Protein accession | YP_001188062 |
Protein GI | 146307597 |
COG category | [S] Function unknown |
COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.447358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00093779 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCCTGC TGATCTCCGA TCTGCACCTC GAAGAGAAAC GCCCGGACAT CACCCGGGCG TTTCTGCATT TTCTCGCCAC CCGCGCGCGC CAGGCCGAGG CGCTGTACAT CCTCGGCGAC TTCTTCGAAG TCTGGATCGG CGACGACGGC ATGACGCCCT TCCAGCATGA GATCGCCGGC GCCCTGCGCG AGCTGAGCGA CAGCGGTACG CGCATCTACC TGATGCACGG CAATCGCGAC TTTCTTATCG GCAAGCGCTT CTGCCGCGAG GCGGGCTGCA CTTTGCTGGG CGATCCGCAC AGGGTGCAGA TGAATGGCGA GCCCGTGCTG CTGATGCACG GCGACAGCCT GTGCACCCTG GACGTCGGTT ACATGAAACT GCGCCGCTGG CTACGCAACC CGCTGTCGCT GTTGATCCTG CGCAACCTGC CGCTCGCTAC CCGACAGAAG CTGGCGCGCA AGCTACGCAA CGAAAGCCGC GCACAGACGC GGATGAAGGC CAGCGAAATC GTCGATGTCA CGCCCGAGGA AGTGGTCAGA GTGATGGGCG AGTACGATGT GCGTACGCTG ATCCATGGTC ATACCCATCG GCCGGCGGTG CATGAGCTGG AAGTCAACGG CCAACCGGCA CGGCGCATCG TGCTGGGGGA CTGGGATCGC CAGGGCTGGG CGCTGCAGGT CGATGGCGAG GGGTTCAACC AGGCGCCGTT CGAGCTGACG CCAGCCTGA
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Protein sequence | MILLISDLHL EEKRPDITRA FLHFLATRAR QAEALYILGD FFEVWIGDDG MTPFQHEIAG ALRELSDSGT RIYLMHGNRD FLIGKRFCRE AGCTLLGDPH RVQMNGEPVL LMHGDSLCTL DVGYMKLRRW LRNPLSLLIL RNLPLATRQK LARKLRNESR AQTRMKASEI VDVTPEEVVR VMGEYDVRTL IHGHTHRPAV HELEVNGQPA RRIVLGDWDR QGWALQVDGE GFNQAPFELT PA
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