| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2573 |
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| Symbol | |
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| ID | 5108040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2837942 |
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| End bp | 2838472 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640503817 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
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| Protein accession | YP_001188061 |
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| Protein GI | 146307596 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.361381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.000887894 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCGAA CCTGCCTCAT CACGGATACG ATCATGATCA AACTGCACAC CAATCACGGC
GTCATCACCC TGAATCTGTT CGCCGACAAG GCCCCGGAAA CCGTGGCCAA CTTCGAGCAA
TACGTGAAGG ACGGCCATTA CGACGGCACC ATCTTCCACC GCGTGATCGG CAACTTCATG
ATCCAGGGCG GCGGTTTCGA GCCGGGCATG AAGCAGAAGC CGACCCGCGC ACCGATCAAG
AACGAAGCCA ACAACGGCGT CGCCAACAAG GTCGGCACCA TCGCCATGGC CCGCACCATG
GAGCCGCATT CGGCCAGCGC GCAGTTCTTC ATCAATGTCG CCGACAACAG CTTCCTTAAC
CACAGCGCAC CGACCGTTCA GGGCTGGGGC TACGCCGTAT TCGGTGAAGT GGTCGAAGGC
ATGGACGTGG TCGAGAAGAT CAAGGGCGTG GCCACCACCA TGAAGGCCGG CCACCAGGAC
GTGCCGGTGG ATGACGTGAT CATCGAGAAG GCCGAAATCG TAGCCGAGTA A
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| Protein sequence | MARTCLITDT IMIKLHTNHG VITLNLFADK APETVANFEQ YVKDGHYDGT IFHRVIGNFM
IQGGGFEPGM KQKPTRAPIK NEANNGVANK VGTIAMARTM EPHSASAQFF INVADNSFLN
HSAPTVQGWG YAVFGEVVEG MDVVEKIKGV ATTMKAGHQD VPVDDVIIEK AEIVAE
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