Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2554 |
Symbol | |
ID | 5108021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2816473 |
End bp | 2817846 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640503798 |
Product | citrate transporter |
Protein accession | YP_001188042 |
Protein GI | 146307577 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000334363 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 1.3683e-16 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGGGTA ATCTGGGGCT GTTGCTGGGC TTGGCGCTGC TGATCTTCAT GGCGCTGCGT GGCGTGAACA TTTTCATAGC GGCGCTGCTG TGTTCGATTC TGGTGGCATT GAGCAATGGC GTTGCAGTGC CCAAGGCGCT TCTGGAACAT TTTCCGTTCG GGCCGCTGGG GGCATTTACA TTCGCCGGCA AGTTCTTCGT GCTGTTTCTC TGCGGCGCCA TCTTCGGCAA GGTCATGGCC GCCAGCCAGG CGGCCAGCAG CATTGCCCAG GCGATCACGC GCGGCCTCGG CACCCAGCGC ACGCTGTGGG TGGCGATGCT GGTCTGCGCG GTGCTGACCT ATGGCGGGGT GGTGGTGTTC GTGGTGATCT TCACCATGTA TCCGCTGGGC ATCACCCTGA TGCGCGAGGC CAACCTGCCG AAGCGCCTGT TCTGCGCCGC GACGGCGTTG GGCGCCGGCA CCTTCACCAT GACCGCGCTG CCGGGCTCGC CCTCGATTCA CAACGTGATC GCTGCCAGCG CTCTGGGCAC CGATCTGTTC GCCGGTGCCT GGATCGGTCT GTTCGCTTCG CTGGTGATGA TCGGCCTGGG CATGGCCTAT CTGCAGCGCG AGTGGCGCCT GGCCCGCGAG CGTGGAGAGG GTTTCGAGGC CAATGTCCAG GACGTGCGCA TGGAGCAGCT GGCCGGCACG CCGGGCAGCG GCCCGCACTG GGGCATGGCG CTGGTGCCGA TCGTCGTGGT GCTGGGGATC ATTCTGTTGC CCCGCGTGAT CGCGCTGTCC GGCATGGTGA TGCCGGGGCA GGGTGCGCTG GGCCAGCTGC TGGCGTTCAG CCAGGCACAG CCGATCCTCT GGCCGAGTCT GGCGCTGGTC ATCGCCACGG GCGTGGCGGT GGTGATGTTC CCGGCGCTAC GGCGCAACAC CATGGGCTTG CTCGGTCAGG GCGCCGATGA CGCCATCATG CCGCTGCTCA ATACCGCGGC GGTGATCGGC TTCGGTGGGG TGGTGACACA GACCGCCGGC TTCGCCCAGT TCGCGCAGTG GATACTGGCG GTCGAGCTGC CGCCGCTGCT GTCGGTGTTC GCCTCGGTCA GCGTGGTGTC GGGTATCGTC GGTTCGTCCT CGGGCGGGCT GCAGATATTC ATGCAGACCC TGGCGCCGCG CTATCTGGAA ATGGGCGTGG AGCCGGAGGT GCTGCACCGT ATCGCCAACA TCACCGCAGG CGGGCTCGAC TCGCTGCCGC ATTGCGGCGC GGTGATCGCC ATGCTGATGA TCATGGGGCT GACCCACAAA CAGGCGTACA AGGACATCTT CGTGATCACC GTACTCATTC CGGTGGTGGC AGCGTTGCTG TGCATTGCGC TGTTGAGCCT GTGA
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Protein sequence | MLGNLGLLLG LALLIFMALR GVNIFIAALL CSILVALSNG VAVPKALLEH FPFGPLGAFT FAGKFFVLFL CGAIFGKVMA ASQAASSIAQ AITRGLGTQR TLWVAMLVCA VLTYGGVVVF VVIFTMYPLG ITLMREANLP KRLFCAATAL GAGTFTMTAL PGSPSIHNVI AASALGTDLF AGAWIGLFAS LVMIGLGMAY LQREWRLARE RGEGFEANVQ DVRMEQLAGT PGSGPHWGMA LVPIVVVLGI ILLPRVIALS GMVMPGQGAL GQLLAFSQAQ PILWPSLALV IATGVAVVMF PALRRNTMGL LGQGADDAIM PLLNTAAVIG FGGVVTQTAG FAQFAQWILA VELPPLLSVF ASVSVVSGIV GSSSGGLQIF MQTLAPRYLE MGVEPEVLHR IANITAGGLD SLPHCGAVIA MLMIMGLTHK QAYKDIFVIT VLIPVVAALL CIALLSL
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