| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2536 |
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| Symbol | |
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| ID | 5108003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2796805 |
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| End bp | 2797566 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640503780 |
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| Product | peptidase C39, bacteriocin processing |
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| Protein accession | YP_001188024 |
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| Protein GI | 146307559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3271] Predicted double-glycine peptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.160882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00642935 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGAAA TTCTCGTGGG CAGCCTGATC GGTTTGTACG GTTTCACCGA GGCTGTCGAC
ATCAAACCGC AGCCCGCCGG TGTCGTGAAC ATCACCCAGC CGCTGCTGCC CAATGGCCCG
CTGCGCGAGT CGGTGATGGT CGAGCCGATG AGCCAGTTGC AGTTTCGCAA CGTCATCCGC
CAGGCCTACG ACTACAGCTG CGGCTCCGCG GCGTTGACCA CGCTGCTGGA TTACTACCTC
GGGCGCAATC TGCAAGAGCG CCAGGTGATG GAGGGGCTGC TGCATTTCGG CGAGGCCGAG
AAGATCATCG AGCGCCGCGG GTTCTCGCTG CTCGACATGA AGCGCTTCGT CACTGCGCTG
GGGTATCAGA GCGGTGGCTT TCGCGCCGGG TTCGATGATC TCGCCCAGCT CGAACACCCG
GCCATCGTGC CGATCGAGTA CGCCGGCTTC AAACATTTCG TGGTGGTGCG CGATGTCTAC
AACGACCACG TCTTCGTCGC CGATCCGGCG CTGGGCAACA TCAGCTTCAC CCGCGTGCGT
TTCGAACAGA TCTGGGACCA GAACGTTCTG TTCGTGATCT TTCCCAGCGG CAACGAGCCA
CCCAATGCCC TGGCGCTCAC CGACCGCGAC CTGCGCATCA TCGATGACCG CACCATCAGT
CTGCTGGCCT TTCGCGAGTT TCCGCAGATG GCCAAGTTCA CCAGCAATCA GGCCGACCAG
TTGGGGTCGG GAGGCGACAT TCAATACATT CGCCGCAAAT GA
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| Protein sequence | MIEILVGSLI GLYGFTEAVD IKPQPAGVVN ITQPLLPNGP LRESVMVEPM SQLQFRNVIR
QAYDYSCGSA ALTTLLDYYL GRNLQERQVM EGLLHFGEAE KIIERRGFSL LDMKRFVTAL
GYQSGGFRAG FDDLAQLEHP AIVPIEYAGF KHFVVVRDVY NDHVFVADPA LGNISFTRVR
FEQIWDQNVL FVIFPSGNEP PNALALTDRD LRIIDDRTIS LLAFREFPQM AKFTSNQADQ
LGSGGDIQYI RRK
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