| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2522 |
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| Symbol | |
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| ID | 5107989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2784103 |
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| End bp | 2785314 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640503766 |
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| Product | aminotransferase AlaT |
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| Protein accession | YP_001188010 |
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| Protein GI | 146307545 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0098496 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.421504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTCA GCAAATCGAA CAAGCTCGCC AACGTCTGCT ACGACATTCG CGGGCCGGTG
CTCAAGCACG CCAAGCGTCT GGAGGAGGAA GGCCATCGCA TCCTCAAGCT GAACATCGGC
AATCCGGCGC CGTTCGGTTT CGAGGCTCCG GAAGAAATTC TTCAGGACGT CATCCGCAAC
CTGCCTACCG CCCAAGGTTA CAGTGACTCC AAGGGGCTGT TCAGCGCGCG CAAGGCGGTG
ATGCAGTACT ACCAGCAGAA GCAGGTCGAA GGCGTCACCA TCGAGGACAT CTACCTCGGC
AACGGCGTGT CCGAACTGAT CGTCATGGCC ATGCAGGCGC TGCTCAACAA CGGTGACGAG
GTGCTCATCC CGGCGCCCGA CTATCCGCTG TGGACCGCTG CTGTGGCGCT GTCCGGCGGC
AAGCCGGTGC ATTACCTGTG CGACGAGCAG GCCGGCTGGT TCCCCGATAT CGCCGACATG
CGCGCCAAGA TCACGCCGAA CACCAAGGCG CTGGTACTGA TCAACCCGAA CAACCCCACC
GGCGCGGTGT ATTCCAAGGA AGTCCTGCAG GACATCGTCG AACTGGCGCG CCAGCACAAC
CTGGTGATCT TCTCCGACGA GATCTACGAC AAGATCCTCT ACGACGAAGC CGTGCACATC
AGCACCGCCT CGCTGGCGCC GGACGTGCTC TGCCTGACCT TCAACGGCCT GTCCAAGAGC
TACCGCGTGG CCGGCTTCCG TTCCGGCTGG GTGGCCATTT CCGGGCCCAA GCACAAGGCG
CAGAGCTACA TCGAAGGCCT GGATATCCTC GCCAACATGC GCCTTTGCGC CAACGTGCCG
AGCCAGCATG CGATCCAGAC CGCGCTGGGC GGCTACCAGA GCATCAACGA CCTGGTACTG
CCCAACGGCC GCCTGCTGGA GCAGCGCAAC CGCGCCTGGG AACTGCTCAA CGACATACCC
GGGGTGAGCT GCGTCAAACC CATGGGCGCG CTGTACGCCT TCCCGCGGAT CGATCCGAAG
GTTTGCCCGA TCCACAACGA CGAGAAGTTC GTCCTCGACC TGCTGCTGTC GGAGAAACTG
CTGATCGTCC AGGGCACCGC CTTCAACTGG CCGTGGCCGG ACCACTTCCG CGTGGTCACC
CTGCCCCGCG TCGACGACCT GGAGCAGGCC ATCGGCCGTA TCGGCAACTT CCTCAAGGGC
TACAGCCAGT AA
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| Protein sequence | MQVSKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP EEILQDVIRN
LPTAQGYSDS KGLFSARKAV MQYYQQKQVE GVTIEDIYLG NGVSELIVMA MQALLNNGDE
VLIPAPDYPL WTAAVALSGG KPVHYLCDEQ AGWFPDIADM RAKITPNTKA LVLINPNNPT
GAVYSKEVLQ DIVELARQHN LVIFSDEIYD KILYDEAVHI STASLAPDVL CLTFNGLSKS
YRVAGFRSGW VAISGPKHKA QSYIEGLDIL ANMRLCANVP SQHAIQTALG GYQSINDLVL
PNGRLLEQRN RAWELLNDIP GVSCVKPMGA LYAFPRIDPK VCPIHNDEKF VLDLLLSEKL
LIVQGTAFNW PWPDHFRVVT LPRVDDLEQA IGRIGNFLKG YSQ
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