Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2501 |
Symbol | |
ID | 5107377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2763820 |
End bp | 2765256 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640503745 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001187989 |
Protein GI | 146307524 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0977203 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA AATTCGACGT GGTAGTCATC GGTGCCGGCC CTGGTGGCTA CGTAGCCGCC ATCAAAGCAG CGCAACTCGG TCTGAAGACT GCCTGCATCG AGAAGTACCA GGGCAAGGAC GGCAAGATCG CCCTCGGCGG TACCTGCCTG AACGTCGGTT GCATTCCCTC CAAGGCGCTG CTGGACAGCT CCTGGAAGTA CCATGAAGCG AAAGAAGGCT TCGCCGTCCA CGGTATCGAA GCCAAGGGCG TCACCATCGA CGTGCCGGCG ATGATCGGTC GCAAGGCCAA CATCGTTAAG AACCTGACCG GCGGCATCGG TGCGCTGTTC AAGGCCAACG GTGTGACCCT GCTGGAAGGC CACGGCAAGC TGCTGGCCGG CAAGCAGGTT GAAGTCACCG GTATCGACGG CAAGACCCAG GTGGTCGAAG GCGCTCACGT GATCATCGCC TCTGGCTCCA AGCCGGTCGA GATCCCCCCG GCACCGGTCG ATCAGGACGT GATCGTCGAC TCCACCGGTG CCCTGGAATT CCAGAGCGTA CCGAAGAAGC TGGGCGTCAT CGGCGCGGGC GTGATCGGTC TGGAGCTGGG CTCGGTATGG GCTCGCCTGG GCTCGGAAGT GACCGTGCTG GAAGCCATGG ACAAGTTCCT TGCCGCTGCC GACGAGCAGA TCGCCAAGGA AGCCCAGAAG ACCCTGACCA AGCAGGGCCT GGACATCCGC CTGGGCGCGC GCGTCACCGC CAGCGAAGTC AAGAAGAAGC AGGTTACCGT CACCTTCACC GACGCCAATG GCGAGCAGAA GATGACCTTC GACAAGCTGA TCGTGGCCGT TGGCCGTCGC CCGGTGACCA CCGATCTGCT GGCTGCCGAC AGCGGCGTGG ATCTGGACGA GCGTGGCTTC ATCTTCGTCA ACGACCAGTG CGAAACCAGC GTTCCGGGCG TTTATGCCAT CGGTGACGTG GTGCGTGGCG CCATGCTCGC GCACAAGGCC TCGGAAGAGG GCGTGATGGT TGCCGAGCGC ATCGCCGGCC ACAAGGCGCA GATGAACTAC GACCTGATCC CGTCCGTGAT CTACACCCAC CCGGAAATCG CATGGGTCGG CAAGACCGAG CAGCAGCTGA AGGCCGAAGG CGTTGCCGTC AACGTCGGTA CCTTCCCGTT CGCGGCCAGC GGCCGCGCCA TGGCTGCCAA CGACACCGGT GGTCTGGTCA AGGTCATCGC TGACGCCAAC ACCGACCGCG TACTGGGCGT TCACGTGATC GGCCCAAGCG CTGCCGAACT GGTGCAGCAG GGCGCGATCG GCATGGAATT CGGCACCAGC GCCGAAGACC TGGGCATGAT GGTCTTCTCC CACCCGACCC TGTCCGAGGC GCTGCACGAA GCGGCCCTCG CGGTCAACGG TGGCGCGATC CACATCGCCA ACCGCAAGAA GCGCTAA
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Protein sequence | MTQKFDVVVI GAGPGGYVAA IKAAQLGLKT ACIEKYQGKD GKIALGGTCL NVGCIPSKAL LDSSWKYHEA KEGFAVHGIE AKGVTIDVPA MIGRKANIVK NLTGGIGALF KANGVTLLEG HGKLLAGKQV EVTGIDGKTQ VVEGAHVIIA SGSKPVEIPP APVDQDVIVD STGALEFQSV PKKLGVIGAG VIGLELGSVW ARLGSEVTVL EAMDKFLAAA DEQIAKEAQK TLTKQGLDIR LGARVTASEV KKKQVTVTFT DANGEQKMTF DKLIVAVGRR PVTTDLLAAD SGVDLDERGF IFVNDQCETS VPGVYAIGDV VRGAMLAHKA SEEGVMVAER IAGHKAQMNY DLIPSVIYTH PEIAWVGKTE QQLKAEGVAV NVGTFPFAAS GRAMAANDTG GLVKVIADAN TDRVLGVHVI GPSAAELVQQ GAIGMEFGTS AEDLGMMVFS HPTLSEALHE AALAVNGGAI HIANRKKR
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