Gene Pmen_2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2490 
Symbol 
ID5107366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2752757 
End bp2753545 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID640503734 
Productdienelactone hydrolase 
Protein accessionYP_001187978 
Protein GI146307513 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.56422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.109355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGA AGACACTGGT TCCCCTGTTG TGCGCCGCAT TCGCCGGTCT TGCCGACGCG 
GCTGTCGTGA CCAAGACGAT TGCCTACGAG ATCGAGGGCG AAGCTTTCGA AGGCGTGCTG
GTATACGACG ACTCGGTGAC CACGCCGCGC CCGGGGCTGC TCGCCGTGCC CAACTGGATG
GGGGTGAACG AGGACACCTT GGCCAAGGCT GCCCGTGCGG CGGGCGACAA GTACGTGGTG
TTCGTCGCCG ACATGTACGG CAAGTCGATT CGTCCGAGCA ACGCCGAAGA AGCGGGGGCC
GCGGCCACTG CCGTGCGCGC CGATCGTCCG CTGATGCGCA AGCGCGCCCA GGCGGCGGTC
GAGGTGCTCA AGGCGCAGAG CGGCGAGGTG GCGCTGGATC TCGACAGGCT CGGCGCCATC
GGCTTCTGCT TCGGCGGCGG CACGGTGCTG GAACTCGCGC GTTCAGGCGC GCCGCTCAAG
GGCTTCGTGT CCTTCCACGG CAATTTGGAC ACGCCCAACC CGAGTGATGC GAAGAACATT
CAGGCGCCGG TGCTGGTGCT GCACGGTGCC GACGATCCGG CCGTGCCGCA GGAGCAGGTT
GACGGCTTCA TCGCCGAAAT GAAGGCGGCC AAGACCGACT GGCAACTGGT CAGCTATGGC
GGCGCGGTGC ACTCGTTCAC CAACCCCAAG GCCAACGTGC CGGGGCGTAA CGAATACCAC
CCGGTGGTGG CCGCGCGGGC CTTCAAGGCG ATGAACGATC TGTTCGACGA GGTCTTCGCC
AAGCAGTGA
 
Protein sequence
MQKKTLVPLL CAAFAGLADA AVVTKTIAYE IEGEAFEGVL VYDDSVTTPR PGLLAVPNWM 
GVNEDTLAKA ARAAGDKYVV FVADMYGKSI RPSNAEEAGA AATAVRADRP LMRKRAQAAV
EVLKAQSGEV ALDLDRLGAI GFCFGGGTVL ELARSGAPLK GFVSFHGNLD TPNPSDAKNI
QAPVLVLHGA DDPAVPQEQV DGFIAEMKAA KTDWQLVSYG GAVHSFTNPK ANVPGRNEYH
PVVAARAFKA MNDLFDEVFA KQ