| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2487 |
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| Symbol | |
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| ID | 5107363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2750490 |
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| End bp | 2751038 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503731 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001187975 |
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| Protein GI | 146307510 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0674358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATC GCGACTTCGA TTACGAAAGC ACCCTGGAAG CCTGCGCGCG TGGCGACGAG
CGCGCCTTCC AGGCGCTCTA TCGGCAGGAG GCCGGGCCAC TGCTCGGCCT GGCCATCAGC
ATGCTGGGCC GCCGCGATAT GGCCGAGGAT TGTCTGCACG ACGCCTTCGT GCGCATCTGG
CAGCACGCCG CGCGCTATCG ACGCGATCTG GGCAGCGGTC GCGCCTGGGT GCACAGCATC
CTGCGCTACC GCGTGCTCAA CGCCCTGCGC AGCGGCGGGC GTCAGGTCGA GGTGGAAGAT
GACTTCATCG AGCGCATGCT GGACGACAGC CCGCAGGCCG AGGCACAGGC GCTGCAGCGA
TCCGAGCAGC GCCTGCTGCG CAGTTGCCTG CAGCGCCTGG AAAGGCCGCG CCGCCATCCG
ATTCTGCTGG CCTTCTACCG TGGCCTGACC CACGAGCAGA TCGCCCGCCG CCTGAGCACA
CCGCTGGGCA CCATCAAGGG CCGTATCCGC GCCGGCCTGC GCGCGCTGCA GGAGTGTCTG
CAAGCATGA
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| Protein sequence | MADRDFDYES TLEACARGDE RAFQALYRQE AGPLLGLAIS MLGRRDMAED CLHDAFVRIW
QHAARYRRDL GSGRAWVHSI LRYRVLNALR SGGRQVEVED DFIERMLDDS PQAEAQALQR
SEQRLLRSCL QRLERPRRHP ILLAFYRGLT HEQIARRLST PLGTIKGRIR AGLRALQECL
QA
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