| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2467 |
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| Symbol | gpsA |
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| ID | 5107343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2730596 |
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| End bp | 2731618 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503711 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001187955 |
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| Protein GI | 146307490 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.226319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.866598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGC TCCAACCCAT TGCCGTACTC GGCGGCGGCA GCTTCGGCAC CGCCCTGGCC
AATCTGCTGG CGGAAAACGG CCAGCGCGTC CTGCAATGGA TGCGCGACCC CGAGCAGGCC
GGGCAGATGC GCCGCAGTGG CGAGAATCCG CGCTACCTCA AAGGCGTCAA GCTGCATCCG
GGCATCGAGC CGACCAGCGA CCTTGGCGCC GCGCTGCAGC AGGCCGAGCT GGTTTTTGTC
GCGCTGCCGT CCAGCGCGTT GCGCGATGCC TTGCAGCCTG TGGCGGCGCA GCTGTCCGGC
AAGATGCTGG TCAGCACCAC CAAGGGCATC GAAGCCAGGA CCTTCAAGCT GATGAGCGAG
ATTCTCGAGG AGATCGCTCC CGATGCCCGC ATTGGTGTGC TGTCCGGGCC GAACCTGGCC
AAGGAGGTGG CCGACCATGC GCTGACCGCC ACGGTGATCG CCAGCGAGGA CGAAGAGCTG
TGCCTGCGTG TCCAGCAGGC GCTGCATGGG CGAACCTTCC GCGTCTATGC CAGTGCCGAC
CGCTTTGGCG TCGAGCTCGG CGGCGCGCTG AAGAACGTCT ACGCCATCAT GTCCGGTATG
GCCGCGGCGC TCGGCATGGG CGAGAACACC AAGAGCATGC TGATCACCCG TGCGCTGGCG
GAGATGACCC GCTTCGCCGT CAAGCTGGGC GCCAACCCCA TGACCTTCCT CGGCCTGGCC
GGCGTGGGCG ATCTGATCGT CACCTGTTCT TCGCCGAAAA GCCGCAACTA TCAGGTCGGC
TTCGCCCTGG GCGAGGGGCT GAGCCTGGAC GAGGCGGTGC AACGCCTCGG CGAGGTCGCC
GAAGGGGTCA ATACTCTGAA GGTCCTCAAG GCGCGTGCCG AGGAACTGGA GGTGTACATG
CCGCTGGTCG CGGGGCTGCA TGCCGTGCTG TTCGAGGGGC GTACGCTGGC TCAGGTGATC
GAACTGTTGA TGCGCGGCGA GCCCAAGACC GATGTCGATT TCATCCCCAC TGCCGGTTTC
TGA
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| Protein sequence | MTELQPIAVL GGGSFGTALA NLLAENGQRV LQWMRDPEQA GQMRRSGENP RYLKGVKLHP
GIEPTSDLGA ALQQAELVFV ALPSSALRDA LQPVAAQLSG KMLVSTTKGI EARTFKLMSE
ILEEIAPDAR IGVLSGPNLA KEVADHALTA TVIASEDEEL CLRVQQALHG RTFRVYASAD
RFGVELGGAL KNVYAIMSGM AAALGMGENT KSMLITRALA EMTRFAVKLG ANPMTFLGLA
GVGDLIVTCS SPKSRNYQVG FALGEGLSLD EAVQRLGEVA EGVNTLKVLK ARAEELEVYM
PLVAGLHAVL FEGRTLAQVI ELLMRGEPKT DVDFIPTAGF
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