Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2454 |
Symbol | |
ID | 5107330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2718762 |
End bp | 2719883 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503698 |
Product | tRNA 2-selenouridine synthase |
Protein accession | YP_001187942 |
Protein GI | 146307477 |
COG category | [R] General function prediction only |
COG ID | [COG2603] Predicted ATPase |
TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.156444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAGA ACTGCACCGA TTACCGCGAT CTCTTTATCA ACGACCGGCC GATGATGGAT GCCCGCGCGC CGGTGGAATT TCACAAGGGC GCCTTTCCCG GCGTCATCAA CCTGCCGCTG ATGAACGACA TCGAGCGGCA GAAGGTCGGC ACCTGCTACA AGCAGCACGG CCAGCAGGCC GCCATCGAGC TCGGGCATCA GCTGGTCAGC GGCCGTACCA AGGCCGAACG CATCGAGGCC TGGGCGAGTT TTGCCAAGGC CAATCCCGAT GGCTACCTGT ACTGCTTCCG CGGTGGCCTG CGCTCGCAGA TCGTGCAGCA ATGGCTGAAA AGCGAGGCGG GCATCGATTA CCCGCGGGTG ATCGGGGGCT ACAAGGCCAT GCGCGGCTTT CTCCTGGAGA CCACCGAGCA GGCAGTGGCC GAGTGCGATT TCGTCCTGGT CGGCGGCATG ACCGGCACCG GCAAGACCGA GGTGCTCGCC CAGCTGCACA ACGCCGTGGA TCTGGAGGCG CATGCCAACC ATCGCGGCTC CAGCTTCGGC AAGCGCGCCA GCGGGCAGCC GGCGCAGATC GATTTCGAGA ATGCCCTGGC CATCGACCTG CTCAAGCGCC GTGCCGCCGG GCAGCGACAG TTCGTTCTGG AGGACGAGGC GCGTCTGATC GGTCGTTGCT CCTTGCCGCT GCCGCTCTAT CAGGGCATGC AGCACTATCC GCTGGTCTGG CTGGAGGACA GCCTGGGCGA TCGCGTCGAG CGCATCCTGC AGGCCTACGT GGTCGAGCTG TGCGCCGAGT TCGTCGCGGT GGAGGGGGCA GAGGCCGGTT TCGCCGCCTT CGCCGCACGC CTGCGCGAAA GTCTGGCCAA TATCACCCGG CGTCTTGGCG GCGAGCGTTA TCAGCGGCTG GCGGCGATCA TGGATCAGGC GCTGGAGGAG CAGGCGCGCG ACGGCCAGGT CGATACCCAT CGCGGCTGGA TCGAAGCCCT GCTGGTGGAG TACTACGATC CCATGTACGT ATTCCAGCGC GAGAGCAAGG CCGGACGCAT CGAGTTCGCC GGCGAGCAGC AGGCGGTGGT GGAGTACTTG CGCCAGCGAA GCGGGCACTT TCCCGAGGCA CCGGCGTCCT AA
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Protein sequence | MRENCTDYRD LFINDRPMMD ARAPVEFHKG AFPGVINLPL MNDIERQKVG TCYKQHGQQA AIELGHQLVS GRTKAERIEA WASFAKANPD GYLYCFRGGL RSQIVQQWLK SEAGIDYPRV IGGYKAMRGF LLETTEQAVA ECDFVLVGGM TGTGKTEVLA QLHNAVDLEA HANHRGSSFG KRASGQPAQI DFENALAIDL LKRRAAGQRQ FVLEDEARLI GRCSLPLPLY QGMQHYPLVW LEDSLGDRVE RILQAYVVEL CAEFVAVEGA EAGFAAFAAR LRESLANITR RLGGERYQRL AAIMDQALEE QARDGQVDTH RGWIEALLVE YYDPMYVFQR ESKAGRIEFA GEQQAVVEYL RQRSGHFPEA PAS
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