| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2444 |
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| Symbol | |
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| ID | 5107320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2708105 |
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| End bp | 2709574 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503688 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001187932 |
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| Protein GI | 146307467 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00221824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCCT GGATCAGCGA TCTATCTCTC AAGTACAAAT TCTGGGCGGT CAACGCCGTC
GCGTTCGTCA TCAGTCTGAT GCTGGTGCTG TTCGCCCTGC ATACCGAGCA GCAGGCGCGC
AGCGCCGACG CCAGGCAGGC CGTCCAGCAC CAGGCACGCC TGCTTCAGCA ATGGCCGCAG
CAGGCCGCAC TGCCCAGCTC GGCCGACATT CAGCTGCTGC AGGGCAATGC CGCCTTGCCA
GGCGCGCGCG GCACGGCCGA TGGCAGCGGC TGGCAAGCGC TGACGCATGA GGCCTGGTTC
GGCACCAACC CCGTCATCGG TGCGCAGCGC GTCACCCTCA GCGATGGACG CAACCTGGCG
ATACTGGCCA GCGCGCCCAG CCTGCTCGAC CTGTTCGCCC AGCACGCGCT GACCTATGCC
ATCGCCGTCG CCGTTCTGAT GCTCCTGCTG CTGGGGGCCT CGCAGCTGCT CATCCGCTTT
CTGCTCAGCC ATCTAAACAG CCTCAAGGAC GTGATGCTGC AGGCCGAACG CAGCGGCGAC
CTGTCGCTGC GTGCAGCCGC GGACAGCCGA GACGAGGTCG GCCAGATGGC CGCCGCCTTC
AATGCCATGC AGGCCGGTTA CCAGCGAGTG GTCGGCACCG TTGGCCAGGT TGCCAGCGAA
CTGAACAACG GCACGCGCAG CCTCGCCGAG CGCATGGGCA GCGTGCGCCA GGGCATGCTC
AGCCAGCAGA GCGAAACCGA CCAGGCAGCC ACCGCCATCA ACGAGATGTC GGCCACCGTG
CAGAACATCG CCGAGCACGC CAGCACCACC CGCGATCAGT CGCATGGCGC CGACCAGCTG
GCCCGCGCCG GACAACAGGT GGTCGGCCGC GTCGAACAGT CCATCGCCGC CCTGTCCCAG
GGCGTGCGCC AGAGCGCCGG CAGCATCGAG CGCCTGGCCG AGGACAGCCA GCACATCAGC
CGCGTGGTCG GGGTGATTCA TGGCATTGCC GAGCAGACCA ACCTGCTCGC GCTCAACGCG
GCGATCGAAG CCGCGCGGGC GGGCGAGATG GGCCGCGGTT TCGCCGTGGT CGCCGACGAG
GTGCGCAATC TGGCCAAGCG CGTGCAGGAC TCCACCGACG AGATCACCCA GATGATCGGC
AGCCTTCAGG GTGGTACGCG AGACGCCGTG GAATTCATGC GCGAAAGCTC GGAAAACGCC
AGCCAGTGCG TGCAGCTGGC GCAAGAGGCA GGCGAATCGC TGGCGGCCAT CACCACCGCG
GTGGCGCTGA TGCGTGACAG CAACACGCAG ATCGCAGTGG CCGCCGCGCA GCAGAGCGAA
GTGGCCGAGG AGCTGAGTCG GTCGGTGGTG GGCATCCGCG ATGTCACCGA GCAGACCGTC
GGGCAGACCG TGGAGTCCGC TGCCACCAGC CAGCAACTGG CCGAACTGGC CAGCGAACTG
AGCAAGGCCA TCCGCCAGCT GCGTCTGTAA
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| Protein sequence | MGAWISDLSL KYKFWAVNAV AFVISLMLVL FALHTEQQAR SADARQAVQH QARLLQQWPQ
QAALPSSADI QLLQGNAALP GARGTADGSG WQALTHEAWF GTNPVIGAQR VTLSDGRNLA
ILASAPSLLD LFAQHALTYA IAVAVLMLLL LGASQLLIRF LLSHLNSLKD VMLQAERSGD
LSLRAAADSR DEVGQMAAAF NAMQAGYQRV VGTVGQVASE LNNGTRSLAE RMGSVRQGML
SQQSETDQAA TAINEMSATV QNIAEHASTT RDQSHGADQL ARAGQQVVGR VEQSIAALSQ
GVRQSAGSIE RLAEDSQHIS RVVGVIHGIA EQTNLLALNA AIEAARAGEM GRGFAVVADE
VRNLAKRVQD STDEITQMIG SLQGGTRDAV EFMRESSENA SQCVQLAQEA GESLAAITTA
VALMRDSNTQ IAVAAAQQSE VAEELSRSVV GIRDVTEQTV GQTVESAATS QQLAELASEL
SKAIRQLRL
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