Gene Pmen_2441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2441 
Symbol 
ID5107317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2704957 
End bp2705391 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID640503685 
ProductDoxX family protein 
Protein accessionYP_001187929 
Protein GI146307464 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.630068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACC TGATCAAGAG CATCACCGCC ACCCAGGCCG GCTTCGGCAT CACCATCCTG 
CGTATCGTCG CCGGTATCAC CTTCGCCGCC CATGGCGCGC AGAAGCTGTT CGGCTGGTTC
GGTGGCTATG GTCTGGACGG CGTGGCGCAG TGGATGGAAA GCATCGGCCT GACGCCGGGC
TACCTGATGG CACTGGGGGC CGGTAGCGCC GAATTCTTCG GCGGTGTGGC GCTGATCATC
GGTCTGCTGG TACGCCCGGC TGCGGTGGTG CTGGCGGTGA CCATGCTGGT GGCCATCTTC
ACCGTGCACT TCGCCAACGG TTTCTTCATG AGCAACAACG GTTACGAGTT CGCCCTGGCG
CTGCTGGCCA TCAGCGTGGC GCTGGTGTTC GAAGGGGCCG GCAAGCTGTC GGTGGATGGC
AAGATCGCTC GCTGA
 
Protein sequence
MNNLIKSITA TQAGFGITIL RIVAGITFAA HGAQKLFGWF GGYGLDGVAQ WMESIGLTPG 
YLMALGAGSA EFFGGVALII GLLVRPAAVV LAVTMLVAIF TVHFANGFFM SNNGYEFALA
LLAISVALVF EGAGKLSVDG KIAR