Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2436 |
Symbol | |
ID | 5107312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2698796 |
End bp | 2699608 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640503680 |
Product | exonuclease III |
Protein accession | YP_001187924 |
Protein GI | 146307459 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.677359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG TCTCGTTCAA TATCAATGGC CTGCGCGCAC GCCCCCACCA GCTCGAAGCG CTGATCGCCA AGCACCAGCC CGACGTGATC GGCCTGCAGG AAACCAAGGT GGCCGACGAG CAGTTCCCCG AAAGCGAGAT TCGCCAGCTC GGCTACCACG TGCACTACCA CGGGCAGAAA GGCCATTACG GCGTCGCCCT GCTCTCGCGC CAGGAGCCCC TGAACCTGCA GAAGGGCTTT CCCAACGATG GCGAGGAATC CCAGCGGCGC TTCATCTACG GCACCTTCGC CGATGCCCAT GGCAACCCGG TCACGGTGAT GAACGGCTAC TTTCCCCAGG GCGAAAGCCG TGACCACCCG GTGAAGTTTC CCGCCAAGCA GCGCTTCTAC GCCGATCTGC AGCAACTGCT GGTGGAACGC TTCGATCCGC AGCAGGCGCT GGTGGTGATG GGCGACATCA ACATCAGCCC TGAGGATTGC GACATCGGCA TCGGCGAGGC CAACCGCCTG CGCTGGCTGA AAACCGGCAA GTGCAGCTTC CTGCCCGAAG AACGCGAGTG GCTGGCCACC CTGAAGAACT GGGGGCTGGT GGACAGCTTC CGCCATCTCA ACCCGACGGT TAACGACCGT TTCAGCTGGT TCGACTACCG CAGCCGCGGC TTCGAGGACG AACCCAAGCG CGGCCTGCGC ATCGACGTGA TCCTCGCCAG CCAGGCCCTG CAGGGTCGCC TCAAGGATGC CGGCATCGAC TATGACCTGC GCGGCATGGA CAAGCCGTCG GACCATGCGC CGATCTGGCT CGAACTGGCC TGA
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Protein sequence | MKIVSFNING LRARPHQLEA LIAKHQPDVI GLQETKVADE QFPESEIRQL GYHVHYHGQK GHYGVALLSR QEPLNLQKGF PNDGEESQRR FIYGTFADAH GNPVTVMNGY FPQGESRDHP VKFPAKQRFY ADLQQLLVER FDPQQALVVM GDINISPEDC DIGIGEANRL RWLKTGKCSF LPEEREWLAT LKNWGLVDSF RHLNPTVNDR FSWFDYRSRG FEDEPKRGLR IDVILASQAL QGRLKDAGID YDLRGMDKPS DHAPIWLELA
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