Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2425 |
Symbol | |
ID | 5108265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2677384 |
End bp | 2678145 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640503669 |
Product | trans-aconitate 2-methyltransferase |
Protein accession | YP_001187913 |
Protein GI | 146307448 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.576064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTGGT CTGCCCAGCA GTACTCCCTG TTCGAACGCC AGCGTACCCG CCCGGTATAC GACCTGCTGG CGGCGGTGCC GCGCGAAGGC ATCGAACTGG CCGTTGACCT GGGTTGCGGT CCCGGCAACT CCACCGCAGT GCTGCAGGCG CATGCGCCGG AGGCGCGGCT GATCGGCATC GACAACAGCG AAGACATGCT GCGCGCCGCC CGCGAGCGCC TGCCACAGGT CAGCTTCCAG TTAGCGGATA TCCAGCACTG GCAGGCCGAG GTGGCGCCGC AGCTGATCCT GGCCAACGCC TCGCTGCAGT GGCTGCCGGA CCATGCCCAG CTCTATCCGG GGCTGCTGAG ACAGCTGGCG CCGGGCGGCT GGCTGGCGAT CCAGACCCCG GACAACCTGC AGGAGCCGGC CCATCGCCTG GCCCGCGAGG TGGCCGCCGT GGGGCCATGG GCGGCGCGCA TCGGCGACGT GCGCCATGCC GAGCGGCACA GCGCACAGAC CTATTACGAC ATCCTCGGCG CCCATGCCAG CGAACTGGAT ATCTGGCGCA CCACCTACTT CCACGTACTG GACAATGCCG CTGCGGTGGT GGAGTGGTTC AAGTCGACGG CGCTGCTGCC GTTCCTGCAG CCGCTGGATG CCGCAGAGCA GGCAGCCTTT CTCGAGCGTT ACCGGGCGGC GATTGCCGAG GCCTATCCGG CGCAGGCCGA TGGCCGGGTG CTGCTGCCGT TCCCGCGTCT GTTCCTGGTG GCTCGGCGCT AG
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Protein sequence | MSWSAQQYSL FERQRTRPVY DLLAAVPREG IELAVDLGCG PGNSTAVLQA HAPEARLIGI DNSEDMLRAA RERLPQVSFQ LADIQHWQAE VAPQLILANA SLQWLPDHAQ LYPGLLRQLA PGGWLAIQTP DNLQEPAHRL AREVAAVGPW AARIGDVRHA ERHSAQTYYD ILGAHASELD IWRTTYFHVL DNAAAVVEWF KSTALLPFLQ PLDAAEQAAF LERYRAAIAE AYPAQADGRV LLPFPRLFLV ARR
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