Gene Pmen_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2388 
Symbol 
ID5108228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2634209 
End bp2636617 
Gene Length2409 bp 
Protein Length802 aa 
Translation table11 
GC content63% 
IMG OID640503632 
ProductDNA translocase FtsK 
Protein accessionYP_001187876 
Protein GI146307411 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0162583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTT TGAAGAATTC CACCACCCAG ATTACCGACT GGCGTCAGAA GCTTCAGTAT 
CGACTGAAGG AAGGCGCATT GATCGCCCTG GGCGCGATGT GCCTGTATCT GCTGATGGCG
CTGTTGACCT ACAACGCTGC CGATCCGGCC TGGGACAATA GCGTCCAGGT CGAGCGCATC
ATCAATGCCG GTGGCAGCAT CGGCGCCTGG CTGTCCAGCG CGTTGTTCGG TGCCCTGGGG
TATTTCGCCT ACATCTTCCC GCTGCTGCTG GGCATCAAGA CCTGGCAGGT GTTCCGCACG
CGCAATCAGC CTTGGCACTG GAACGGCTGG TTGTTTTCCT GGCACAGCAT TGGCCTGGTA
TTCCTGATTC TCTCGGGCGC CGCTCTGGGC GACATTCACT TCGGCGCAGC CGCCGGCATG
CAGGGCTCCG GCGGCGGCAT GCTCGGCGCC AGTCTCGGTG ACCTGGCCGT GCATGCGCTG
AACGTGCAGG GCAGCACGCT GCTGTTCCTG GCTCTGTTTC TGTTCGGCCT GACCGTTTTC
ACCGATCTGT CCTGGTTCCG CGTGATGGAC CTGACGGGCA AGATCACCCT CGACCTGATC
GAGCTGATTC ATGGCGCCAT CACCGGCTGG TGGAACGCCC GCAGCGAGCG CAAGCAGATG
GTTGCGCAGC TTCGCGAGCT GGATGACCGC GTCATCGAGG TCGCCGCGCC GGTGGTGTCG
GATCGTCGTG AGCAGGCCAA GGTCAAGGAG CGCCTGATCG AGCGCGAAGA GTCCCTGAGC
AAGCACATGA GCGAGCGCGA GAAGCGTCCC GCGCCGGTGA TCACCCCGCC GGCACCGCCG
AAGGCAGCCG AACCGAGCAA GCGCGTGCTG AAGGAAAAAC AGGCGCCGCT GTTCGTCGAC
ACCGCCATCG AAGGCAGCCT GCCGCCGATT TCCATTCTCG ATGCCGCCGA GAAGAAGCAG
AAGCAGTTCT CCCCCGAGTC GCTGGAGGCC ATGTCGCGCC TGCTGGAGAT CAAGCTCAAG
GAGTTCGGTG TCGACGTGGT GGTCGAGTCG GTCCATCCCG GCCCGGTGAT TACCCGTTTC
GAGATTCAGC CCGCCGCCGG CGTCAAGGTC AGCCGCATTT CCAACCTGGC CAAGGACCTG
GCGCGCTCGA TGGCCATGGT CAGCGTGCGC GTGGTCGAAG TGATTCCCGG CAAGACCACC
GTGGGCATCG AGGTGCCCAA CGAAGATCGG CAGATCGTGC GTTTTTCCGA GGTGCTGTCC
TCGAGCGAAT ACGACGACGC CAAATCGCCA GTGACCCTGG CGCTGGGGCA CGATATCGGC
GGTCGCCCGG TGATTGCCGA TCTGGCCAAG ATGCCGCACC TGCTGGTGGC CGGTACCACC
GGTTCCGGTA AGTCGGTGGG CGTCAATGCG ATGATCCTGT CAGTGCTGTT CAAGTCCACG
CCGGAAGAGG CGCGGATGAT CATGATCGAC CCGAAGATGC TTGAACTGTC GATCTACGAA
GGCATTCCGC ACCTGCTGTG CCCGGTGGTC ACCGACATGA AGGAGGCGGC CAACGCGCTG
CGCTGGTCGG TCGCCGAGAT GGAGCGCCGT TACAAGCTGA TGGCGGCCAT GGGCGTGCGT
AACCTGGCGG GCTTCAACCG CAAGGTGAAG GATGCCATCG AGGCCGGTAC GCCGTTGCAT
GATCCGCTCT ACAAGCGCGA GTCGATGGAC GATGAGCCGC CGCACCTGAA AACGCTGCCG
ACCATCGTCG TGGTCGTCGA TGAATTCGCC GACATGATGA TGATCGTCGG CAAGAAGGTC
GAAGAACTGA TCGCGCGTAT CGCGCAGAAG GCGCGTGCCG CCGGCATCCA CCTGATTCTC
GCCACCCAGC GTCCGTCGGT GGACGTGATC ACCGGCCTGA TCAAGGCCAA CATCCCCACC
CGCATGGCGT TCCAGGTGTC GAGCAAGATC GACTCGCGCA CCATTCTCGA CCAGGGCGGT
GCCGAACAGC TGCTCGGCCA CGGCGATATG CTCTACCTGC CGCCGGGTAC CGGTCTGCCG
ATTCGTGTGC ATGGCGCCTT CGTCTCCGAT GACGAAGTGC ATCGCGTGGT CGAGGCCTGG
AAGCAGCGCG GTGCGCCGGA TTACATCGAG GACATTCTCG CCGGTGTCGA GGAAAGCGGC
AGCGGCTTCG AAGGTGGCGG CGGTGGCGAA GGCGGCGAGG GCAGCGAGGA AGACCCGCTG
TACGACGAGG CCGTCAACTT CGTTCTGGAA AGCCGCCGTG CCTCCATTTC CGCGGTACAG
CGCAAGCTGA AGATCGGCTA CAACCGCGCC GCGCGAATGA TCGAGGCGAT GGAGATGGCT
GGTGTGGTCA GTTCGATGAA TACCAACGGC TCGCGCGAGG TACTCGCGCC CGGTTCATCA
CGTGACTGA
 
Protein sequence
MAVLKNSTTQ ITDWRQKLQY RLKEGALIAL GAMCLYLLMA LLTYNAADPA WDNSVQVERI 
INAGGSIGAW LSSALFGALG YFAYIFPLLL GIKTWQVFRT RNQPWHWNGW LFSWHSIGLV
FLILSGAALG DIHFGAAAGM QGSGGGMLGA SLGDLAVHAL NVQGSTLLFL ALFLFGLTVF
TDLSWFRVMD LTGKITLDLI ELIHGAITGW WNARSERKQM VAQLRELDDR VIEVAAPVVS
DRREQAKVKE RLIEREESLS KHMSEREKRP APVITPPAPP KAAEPSKRVL KEKQAPLFVD
TAIEGSLPPI SILDAAEKKQ KQFSPESLEA MSRLLEIKLK EFGVDVVVES VHPGPVITRF
EIQPAAGVKV SRISNLAKDL ARSMAMVSVR VVEVIPGKTT VGIEVPNEDR QIVRFSEVLS
SSEYDDAKSP VTLALGHDIG GRPVIADLAK MPHLLVAGTT GSGKSVGVNA MILSVLFKST
PEEARMIMID PKMLELSIYE GIPHLLCPVV TDMKEAANAL RWSVAEMERR YKLMAAMGVR
NLAGFNRKVK DAIEAGTPLH DPLYKRESMD DEPPHLKTLP TIVVVVDEFA DMMMIVGKKV
EELIARIAQK ARAAGIHLIL ATQRPSVDVI TGLIKANIPT RMAFQVSSKI DSRTILDQGG
AEQLLGHGDM LYLPPGTGLP IRVHGAFVSD DEVHRVVEAW KQRGAPDYIE DILAGVEESG
SGFEGGGGGE GGEGSEEDPL YDEAVNFVLE SRRASISAVQ RKLKIGYNRA ARMIEAMEMA
GVVSSMNTNG SREVLAPGSS RD