| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2383 |
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| Symbol | |
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| ID | 5108223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2628848 |
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| End bp | 2630236 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503627 |
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| Product | uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase |
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| Protein accession | YP_001187871 |
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| Protein GI | 146307406 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.806488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.00704026 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATTCC TTCCGCTGTT CCACAAGCTG CAGGGTCGCC CGGTACTGGT TATCGGCGGT
GGCGAGGTCG CGCTGCGCAA GGCGCGCCTG CTGAGCGATG CCGGCGCGCG TCTGCGCGTC
GTTGCGCCGG AGATTCGCAG CGAGTTGCAA GAACTGGCCG GGGCCGACGG CATTTGCCTG
CGCGGCTATG CCAGCAGCGA TCTGCAGGGC GTCGCCCTGG TCATCGCTGC CACCGATGAC
GAGCCGCTCA ATGCACGTAT TTCTGCCGAG GCTCAGGCGC AGGGCATCCC GGTCAACGTG
GTGGACGCGC CGGCACTGTG CAGCGTGATC TTCCCGGCCA TCGTCGACCG CTCGCCGCTG
ATCGTCGCGG TCAGCAGCGG CGGCGATGCG CCGGTTCTGG CCAGGCTGAT CCGCGCCAAG
ATCGAAACCT GGATTCCGGC CACCTATGGC CAGCTGGCCA ACCTGGGCAA GCGCTTCCGT
GATCGGGTCA AGCAACTGTT TCCCGATGTG CAGCAACGTC GGGTGTTCTG GGAGGACGTC
TTCCAGGGGC AGATCGCCGA GAGCGTGTTT GCCGGCAAGC CGGAAGAGGG TGAGCGCCTG
CTGGAGGAGC GTCTGGCCGG TGCGGCGCCA CGTGCGCTGG GCGAGGTCTA TCTGGTCGGC
GCCGGCCCAG GCGATCCCGA TCTGCTGACC TTTCGCGCCC TGCGCCTGAT GCAGCAAGCC
GATGTGGTGC TCTACGACCG CCTGGTGGCG CCGGCCATCA TCGAGCTGTG CCGGCGCGAT
GCCGAGCGCA TCTACGTCGG CAAGCGCCGC GCCGATCATG CCGTACCGCA GGAGCAGATC
AACCAGCTGC TGATCGACCT GGCGCGTCAG GGCAAGCGCG TGCTGCGCCT GAAAGGGGGC
GATCCGTTCA TCTTCGGCCG CGGTGGCGAA GAGATCGAGC AACTGGCCGC CGAGGACATT
CCCTTCCAGG TAGTGCCGGG TATTACCGCA GCCTCCGGTT GCGCGGCCTA TGCCGGAATT
CCGCTGACCC ATCGCGATCA TGCGCAGTCG GTGCGTTTCG TCACCGGTCA CCTCAAGGAT
GGCAGCAGCA ATCTGCCCTG GAAGGATCTG GTGGCGCCTG GGCAGACGCT GGTGTTCTAC
ATGGGCCTGG TCGGGTTATA CGGCATCTGC GAGCAATTGA TCGCACACGG CCGCTCGGCT
GCAACGCCCG CTGCGTTGGT GCAGCAGGGC ACCACGCAGA ATCAGCGGGT CTTCACCGGC
ACCCTGGAAA CCCTGCCGCA GCTGGTAGCG CAGCACGAAG TGCATGCGCC CACCCTGGTG
ATAGTCGGAG AGGTGGTCAC CCTGCGGGAC AAGCTGGCCT GGTTCGAAGG CGCTCAGGGC
AGCCTCTGA
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| Protein sequence | MQFLPLFHKL QGRPVLVIGG GEVALRKARL LSDAGARLRV VAPEIRSELQ ELAGADGICL
RGYASSDLQG VALVIAATDD EPLNARISAE AQAQGIPVNV VDAPALCSVI FPAIVDRSPL
IVAVSSGGDA PVLARLIRAK IETWIPATYG QLANLGKRFR DRVKQLFPDV QQRRVFWEDV
FQGQIAESVF AGKPEEGERL LEERLAGAAP RALGEVYLVG AGPGDPDLLT FRALRLMQQA
DVVLYDRLVA PAIIELCRRD AERIYVGKRR ADHAVPQEQI NQLLIDLARQ GKRVLRLKGG
DPFIFGRGGE EIEQLAAEDI PFQVVPGITA ASGCAAYAGI PLTHRDHAQS VRFVTGHLKD
GSSNLPWKDL VAPGQTLVFY MGLVGLYGIC EQLIAHGRSA ATPAALVQQG TTQNQRVFTG
TLETLPQLVA QHEVHAPTLV IVGEVVTLRD KLAWFEGAQG SL
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