Gene Pmen_2379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2379 
Symbol 
ID5108219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2626107 
End bp2626406 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content68% 
IMG OID640503623 
ProductDsrH family protein 
Protein accessionYP_001187867 
Protein GI146307402 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2168] Uncharacterized conserved protein involved in oxidation of intracellular sulfur 
TIGRFAM ID[TIGR03011] sulfur relay protein TusB/DsrH 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.764227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0193551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC TGCATATCCT TTCCCACTCA CCGTTCGCCG ACAGCCGCCT GGCCAGTTGC 
CTGCGCCTGC TGGGCACCGA CGACGCGCTG CTGCTCAGCG GCGATGCGGT CTACGCCCTG
CAGCCCGATA CCGCCAACCT GCAGGCGCTG CAGCTGATAC CCGCCAGCGT CGCGCTCTAC
GCCCTGGACG AGGACCTCGC CGCACGCGGC CTGCAGGCGC CCGAGCGCGT GAGCGCCGTG
GATTACCCGG CATTCGTCGA TCTCTGCACC CGCTACGCCA AGGTCAACAG TTGGCTATGA
 
Protein sequence
MATLHILSHS PFADSRLASC LRLLGTDDAL LLSGDAVYAL QPDTANLQAL QLIPASVALY 
ALDEDLAARG LQAPERVSAV DYPAFVDLCT RYAKVNSWL