Gene Pmen_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2378 
Symbol 
ID5108218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2625748 
End bp2626107 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID640503622 
Productsulfur relay protein TusC 
Protein accessionYP_001187866 
Protein GI146307401 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2923] Uncharacterized protein involved in the oxidation of intracellular sulfur 
TIGRFAM ID[TIGR03010] sulfur relay protein TusC/DsrF 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.643649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0198653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGT CGCTCTTGAT CATCAGCCGC CAGGCGCCCT GGAGCGGCCC CGGCGCCCGC 
GAGGCACTGG ACATCGCCTT GGCCGGCGGC GCCTTCGACC TGCCCATCGG CATGCTGTTT
CTCGACGATG GCGTGTTCCA GCTGAGCACG CGCCAGCAGC CCGGCAATCT GCAGCAGAAG
GACCTCGGCG CCAATCTGCA GGCCCTGCCG ATGTTCGGCG TGGAGGACCT GTACGCCAGC
CAGCGCAGCC TGGCCGAGCG CGGACTCGAT ACCGCCGAAC TGAATATCTC GGTACAGCGC
CTCGACGACA ATGCGCTGAC CACCCTCCTC GATCGTTACG ACCAGGTGAT CACCCTCTGA
 
Protein sequence
MSKSLLIISR QAPWSGPGAR EALDIALAGG AFDLPIGMLF LDDGVFQLST RQQPGNLQQK 
DLGANLQALP MFGVEDLYAS QRSLAERGLD TAELNISVQR LDDNALTTLL DRYDQVITL