Gene Pmen_2349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2349 
Symbol 
ID5108584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2594365 
End bp2594742 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content70% 
IMG OID640503591 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001187839 
Protein GI146307374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.1277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00852425 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGAGC GACTGGACCA TCTGGTGCTG ACCGTGGCCG ATATCGAGGC CACCGTGGCC 
TTCTACGAAC GGGTGCTGGG CATGCGCCAC GAGCGCTTCG GCGCCGGGCG CAGCGCCCTG
GTGTTCGGCC GGCAGAAGTT CAACCTGCAC CAGGCCGGCC GCGAGTTCGA ACCCAAGGCC
GCCAGACCGA CGCCGGGCGC CATCGACCTG TGCCTGATCA CCGACTGGCC GATGCCCCGG
GTGCTTGCGC ATCTGGCGGA GCAGGGCGTG GAGGTGGAGG AGGGGCCGGT GGCGCGCACC
GGCGCCATCG GGCCGATCGA GTCGGTGTAT TTCCGCGACC CGGACGGCAA CCTGATCGAG
GTCAGCCGCT ACCCGTAG
 
Protein sequence
MIERLDHLVL TVADIEATVA FYERVLGMRH ERFGAGRSAL VFGRQKFNLH QAGREFEPKA 
ARPTPGAIDL CLITDWPMPR VLAHLAEQGV EVEEGPVART GAIGPIESVY FRDPDGNLIE
VSRYP