Gene Pmen_2347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2347 
Symbol 
ID5108582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2592779 
End bp2593288 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID640503589 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001187837 
Protein GI146307372 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.598382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0217418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC CCTGTACCGA AGGTTTCGCG CGCCAGGCGA TATCCCTGAC GCTGAACGGC 
AGCCCCTGCC AGGTCGAGGT CCAGCCCTGG ATCACCACGC TCGATCTGCT GCGCGAGCGG
CTCGATCTGA TCGGCACCAA GAAGGGCTGC GACCACGGTC AGTGCGGGGC CTGCACCGTG
CTGCTCGACG GTCGCCGGGT CAATGCCTGC CTGCTGCTGG CGGTGATGCT CGACGGCCAT
GAACTGACCA CCATCGAAGG CCTGGCTGCA GGCGGTGAAC TGCACCCGAT GCAGCGCGCC
TTCATCCGGC ACGATGCCTT CCAGTGCGGC TACTGCACGC CGGGGCAGAT CTGCTCGGCG
GTGGGCCTGG CCGGCGAGGG CAGGCTGGAG GGCGCCGCCG ACCTGCGGGA ACGCATGAGC
GGCAACCTGT GCCGCTGCGG GGCCTACAGC AATATCCTGG CGGCCATCGA AGAGGCCTTG
CCCGCCTGTG AATCGGAGGT GCGCTCATGA
 
Protein sequence
MSTPCTEGFA RQAISLTLNG SPCQVEVQPW ITTLDLLRER LDLIGTKKGC DHGQCGACTV 
LLDGRRVNAC LLLAVMLDGH ELTTIEGLAA GGELHPMQRA FIRHDAFQCG YCTPGQICSA
VGLAGEGRLE GAADLRERMS GNLCRCGAYS NILAAIEEAL PACESEVRS