| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2335 |
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| Symbol | |
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| ID | 5108570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2578122 |
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| End bp | 2579159 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503577 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase |
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| Protein accession | YP_001187825 |
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| Protein GI | 146307360 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00405525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0104415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC TGTGCATTCT CGGCTCCGGC ATGGTCAGCG CGGTCGGCCT CAGCGCCCCG
GCCAGTTGCG CGGCCATTCG CTGCGCCATC GACAACTTCC AGGAAACCCG CTTCATCGAC
CGTGGCGGCG AATGGCTGAT CGCCGCCAGC GTGCCGCTGG AACAACCTTG GCGCGGCCGC
ACCAAGCTGA TCCAGATGGC CGCCCGCGCC GTCGCCGAAG CCCTGCAGAG CACGCCTGGG
GTCTACCCGG CGCAAACCCC GCTGCTGCTC GGCGTGGCCG AACAGGAGCG CCCCGGACGC
CTCGACGGTT TGGACATCGA ACTGCTGCAC GATATCGAAC GGGAGCTGGG CCTGGCCTTT
CATCCCAGCT CCAACGTCAT CGCCCGCGGC CGCGTGAGCG GCGCCGTGGC ACTACTCAAT
GCACGCAAGC TGATCTACCA GGGCGGCCAT CGCCACGTGC TGATCGCCGG TGTCGACTCC
TTTCTCAGCG CACCGACCCT GGCCGCCTTC GAGGAGCGCG AGCGCCTGCT GACCAGCCAG
AATTCCAACG GCTTCATTCC CGGTGAAGGC GCCGCTGCCG TGGTGATCGG CGCTCCGGTC
GCCAGCGAGG AACCGCAACT GGCCTGCCTC GGCCTGGGCT TCGGCATGGA GCCGGCCACC
GTGGAAAGCG AAGACATCCC CCTGCGCGCC GAAGGCCTGA CCCAGGCCAT CCGCGCCGCT
CTGGCCGAAG TGGGCTGCGG CCTGGAACAG ATGGACTATC GCGTCACCGA TCTATCCGGC
GAGCAGTACT ACTTCAAAGA GGCCTCGCTG GCGCTCAGTC GCACCTTGCG CGTGCGCAAG
GAGTTCTTCC ATATCTGGCA CCCGGCCGAC TGCATCGGCG AAGTCGGCGC CGCCATCGGC
CCGGCCATGC TCACCGTGAC CCTGGCCGCC AGCCGCAAGG CTTACGGCGA TGGCCCGAAC
ATCCTCTGTC ACCTCGGCAA CGACGCCGGC CAGCGCGCCG CCGCCCTGCT CAGCTACCAA
ACGGTGAGGG CTGCCTGA
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| Protein sequence | MSALCILGSG MVSAVGLSAP ASCAAIRCAI DNFQETRFID RGGEWLIAAS VPLEQPWRGR
TKLIQMAARA VAEALQSTPG VYPAQTPLLL GVAEQERPGR LDGLDIELLH DIERELGLAF
HPSSNVIARG RVSGAVALLN ARKLIYQGGH RHVLIAGVDS FLSAPTLAAF EERERLLTSQ
NSNGFIPGEG AAAVVIGAPV ASEEPQLACL GLGFGMEPAT VESEDIPLRA EGLTQAIRAA
LAEVGCGLEQ MDYRVTDLSG EQYYFKEASL ALSRTLRVRK EFFHIWHPAD CIGEVGAAIG
PAMLTVTLAA SRKAYGDGPN ILCHLGNDAG QRAAALLSYQ TVRAA
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