| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2331 |
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| Symbol | |
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| ID | 5108566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2571592 |
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| End bp | 2574294 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503573 |
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| Product | ATPase |
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| Protein accession | YP_001187821 |
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| Protein GI | 146307356 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0518917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0250901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGA TCAGCCGCGC CGCATTGTTC GGCAAGTTGA ACAGCCTGGC CTACAAGGCC
ATCGAAGCCG CCACGGTATT CTGCAAGCTG CGCGGCAATC CCTATGTCGA GCTGGTGCAC
TGGCTGCATC AGATTCTCCA GCTGCAGGAT TCCGACCTGC ACCAGCTGGT GCGCCAGTTC
AACATCGACC CGGCGCGACT GGCCAAGGAC ATCACCGAGG CGCTGGATCG CCTGCCGCGC
GGTTCCACCT CGATCACCGA CCTGTCGTCC CACGTCGAAG AGGCGGTCGA GCGTGGCTGG
GTCTACGGCA GCCTGATGTT CGGCGAAAGC CAGGTGCGCA CCGCCTACCT GATCGTCGGC
ATCCTCAAGA CACCGAGCCT GCGCCATGCG CTGTCGGCCA TTTCCCGCGA GTTCGACAAG
ATCAAGGTGG AAAGCCTGAT CGAGCGCTTT GACGAGTATG TCGGCAACTC GCCGGAGAAC
GGCCTCGGTG CCAGCGACGG ATTCAACGCC GCCGGGGCGC CGGGCGAAGC CAGCGGCGCC
ATGGCCCCCA GTGCCATGGG CAAGCAGGAG GCGCTCAAGC GCTTCACCGT CGACCTCACC
GAACAGGCGC GCAGCGGCAA GCTCGACCCC ATAGTCGGGC GCGACGAGGA GATTCGTCAG
TTGGTGGACA TCCTCATGCG CCGCCGGCAG AACAACCCGA TCCTCACTGG CGAGGCCGGC
GTCGGCAAGA CCGCGGTGGT CGAGGGCTTT GCCCTGCGCA TCGTCGCCGG CGACGTGCCG
CCGAGCCTCA AGGATGTCGA ACTGCGCGCG CTCGACGTCG GCCTGCTGCA GGCTGGCGCA
AGCATGAAAG GCGAATTCGA GCAGCGCCTG CGCCAGGTGA TCGAGGACGT GCAGAGCTCG
CCCAAGCCGA TCATCCTGTT CATCGACGAG GCGCATACCC TGGTCGGCGC CGGTGGCGCG
GCCGGCACCG GCGACGCCGC CAACCTGCTC AAGCCAGCAC TGGCGCGCGG CACCCTGCGC
ACCGTGGCCG CCACCACCTG GGCCGAGTAC AAGAAGCACA TCGAGAAGGA CCCGGCGCTG
ACCCGGCGCT TTCAGGTGGT GCAGGTGGAC GAGCCGTCCG AGCACAAGGC GATCCTGATG
ATGCGCGGCG TGGCCTCGAC CATGGAGCAG CACCACAAGG TGCAGATCCT CGACGAGGCG
CTGGAGGCCG CGGTCAAGCT GTCGCACCGC TACATCCCGG CGCGCCAGTT GCCGGATAAA
TCGGTGAGCC TGCTCGACAC CGCCTGCGCC CGCGTCGCCA TCAGCCTGCA TGCGGTGCCG
GCCGAGGTGG ACGACAGCCG CCGGCGTATC GAGGCACTGG AGACCGAGCT GGCCATCATC
GCCCGCGAGC AGGCCATCGG CATCGCCATC GGCAGTCGCC AGGACGACAC GCAGGCCGCT
CTGGATGAGG AGCGCACCCG CCTGGGCGAG CTGGAAGCGC GCTGGGCCGA GGAAAAGACC
CTGGTCGACG AGCTGCTGGC CACCCGCGCC AGCCTGCGCG CCGCCGCCGA GCCGGTGGAC
GGCACCAGCC GCGAAGGTGG CGCCGACACC CCTGCCCTGA GCCAGGAGGA ACTGGACACC
CTGCGCACCC GTCTCAGCGA ACTGCAGAAC AGTCTGAACG CTCTGCAAGG GGAAAATCCG
CTGATCCTGC CCACGGTCGA TTATCAGGCC GTGGCCTCGG TGGTGGCCGA CTGGACCGGC
ATTCCGGTCG GGCGCATGGC GCGTAACGAG ATCGATACCG TGCTGCGTCT CGACGAGCAC
CTGAAAAAAC GCATCATCGG TCAGGACCAC GCCCTGGCGA TGATCGCCAA GCGCATCCAG
ACCTCACGCG CCGGGCTGGA CAACCCGAGC AAGCCGATCG GCGTGTTCCT CCTCGCCGGC
ACCTCCGGGG TGGGCAAGAC CGAGACCGCG CTGGCCCTGG CCGAGGCCAT GTACGGCGGC
GAGCAGAACG TCATCACCAT CAACATGAGC GAATTCCAGG AGGCGCACAC CGTCTCCACC
CTCAAGGGCG CCCCGCCCGG CTACGTCGGC TACGGCGAAG GCGGCGTGCT GACCGAGGCC
GTCAGGCGCA AGCCCTACAG CGTGGTGCTG CTGGATGAGG TGGAGAAGGC GCATCCGGAC
GTGCACGAGA TCTTCTTCCA GGTCTTCGAC AAGGGCGTGA TGGAAGATGG CGAGGGTCGC
CTGATCGACT TCAAGAACAC CCTGATTCTG CTCACCACCA ACGCCGGCAC CGACATGATC
GCCAGTCTGT GCAGCGACCC GGAGCTGATG CCCGATCCGG ACTCCATCGC CAAGGCCCTG
CGCGAGCCGC TGCTCAAGGT ATTCCCGCCG GCGCTGCTCG GCCGTCTGGT GACCATCCCC
TACTACCCGC TCTCCGACAC CATGCTCAAG GCCATCACCC GGCTGCAGCT CGACCGCATC
AAGAAGCGCG TGGAAGCCGG CCACAAGGTG CCATTCGAGT ACGACGACAG CGTGATCGAC
CTGATCGTCT CGCGCTGCAC CGAGATCGAG AGCGGCGGCA GGATGATCGA CGCCATTCTG
ACCAACAGCC TGTTGCCGGA CATGAGTCGT GAGTTCCTCA CCCGCATGCT CGAGGGCAAA
CCGCTCGCCG GCGTGCGCAT CAGCCAACGC GACAACGCCC TGCACTACGA CTTCGGCGCC
TAA
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| Protein sequence | MSEISRAALF GKLNSLAYKA IEAATVFCKL RGNPYVELVH WLHQILQLQD SDLHQLVRQF
NIDPARLAKD ITEALDRLPR GSTSITDLSS HVEEAVERGW VYGSLMFGES QVRTAYLIVG
ILKTPSLRHA LSAISREFDK IKVESLIERF DEYVGNSPEN GLGASDGFNA AGAPGEASGA
MAPSAMGKQE ALKRFTVDLT EQARSGKLDP IVGRDEEIRQ LVDILMRRRQ NNPILTGEAG
VGKTAVVEGF ALRIVAGDVP PSLKDVELRA LDVGLLQAGA SMKGEFEQRL RQVIEDVQSS
PKPIILFIDE AHTLVGAGGA AGTGDAANLL KPALARGTLR TVAATTWAEY KKHIEKDPAL
TRRFQVVQVD EPSEHKAILM MRGVASTMEQ HHKVQILDEA LEAAVKLSHR YIPARQLPDK
SVSLLDTACA RVAISLHAVP AEVDDSRRRI EALETELAII AREQAIGIAI GSRQDDTQAA
LDEERTRLGE LEARWAEEKT LVDELLATRA SLRAAAEPVD GTSREGGADT PALSQEELDT
LRTRLSELQN SLNALQGENP LILPTVDYQA VASVVADWTG IPVGRMARNE IDTVLRLDEH
LKKRIIGQDH ALAMIAKRIQ TSRAGLDNPS KPIGVFLLAG TSGVGKTETA LALAEAMYGG
EQNVITINMS EFQEAHTVST LKGAPPGYVG YGEGGVLTEA VRRKPYSVVL LDEVEKAHPD
VHEIFFQVFD KGVMEDGEGR LIDFKNTLIL LTTNAGTDMI ASLCSDPELM PDPDSIAKAL
REPLLKVFPP ALLGRLVTIP YYPLSDTMLK AITRLQLDRI KKRVEAGHKV PFEYDDSVID
LIVSRCTEIE SGGRMIDAIL TNSLLPDMSR EFLTRMLEGK PLAGVRISQR DNALHYDFGA
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