| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2323 |
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| Symbol | |
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| ID | 5108558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2564386 |
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| End bp | 2565882 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503565 |
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| Product | hypothetical protein |
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| Protein accession | YP_001187813 |
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| Protein GI | 146307348 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0970803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0167765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGA CGATGACCGA ACAGCAGGCC CAGGCCGGGA CTGCTACCGC AGAAGGCGGC
GACTTCGCCG CCCTCCTCCT GCAGGAATTC AAACCCAAGA CCGAGCGCGC CCGCGAGGCG
GTGGAAACCG CAGTGCGCAC CCTGGCCGAA CATGCGCTGG CAAAGACCGA CCTGATCTCC
AACGATGCGA TCAAGTCCAT CGAGTCGATC ATCGCGGCCA TCGACGCCAA GCTCACCGAG
CAGATCAACC TGATCATGCA CCATCAGGAC TTCCAGCAAC TGGAGAGCGC CTGGCGCGGG
CTGAGCTACC TGGTCAACAA CACCGAGACC GACGAGCAGC TGAAGATCCG CGTGATGAGC
ATCTCCAAGG GCGAGCTGCA CAAGACCCTG AAGAAGTTCA AGGGCACCGC CTGGGACCAG
AGCCCGATCT TCAAGAAGAT GTACGAAGAG GAATACGGCC AGTTCGGCGG CGAGCCCTAC
GGCTGTCTGG TCGGCGATTA CTACTTCGAC CAGTCGCCGC CGGACGTGGA ACTGCTCACC
GAACTGTCCA AGGTCTGCGC GGCCATGCAC GCGCCGTTCA TTTCGGCGGC ATCGCCCACG
GTCATGGGCA TGGGCTCCTG GCAGGAGCTG TCCAACCCGC GTGACCTGAC CAAGATCTTC
ACCACCCCCG AATACGCCGC CTGGCGCTCG CTGCGCGAGT CCGAGGACGC CCGCTACATC
GGCCTGACCA TGCCGCGCTT CCTCGCCCGC CTGCCGTACG GGGCCAAGAC CGATCCGGTC
GATGCCTTTG CCTTCGAGGA AGACACCAGC GGCGCCGACA GCAGCAAGTA CACCTGGGCC
AACTCGGCCT ACGCCATGGC GGTGAACATC AACCGCTCGT TCAAGCTCTA CGGCTGGTGC
TCGCGCATCC GCGGCGTGGA GTCCGGCGGC GAGGTGACCA ACCTGCCCGC CCACACCTTC
CCCACCGACG ATGGTGGCGT GGACATGAAG TGCCCCACCG AGATCGCCAT TTCCGACCGC
CGCGAGGCCG AGCTGGCGAA GAATGGCTTC ATGCCCCTGC TGCACAAGAA GAACACCGAC
CTGGCCGCGT TCATCGGTGC GCAGTCGTTG CAGAAGCCGG CCGAGTACGA CGACCCCGAC
GCAACGGCCA ACGCCAACCT TGCCGCGCGT CTGCCCTACC TGTTCGCCAC CTGCCGCTTC
GCGCATTACC TCAAATGCAT CGTTCGCGAC AAGATCGGCT CGTTCAAGGA GAAGGACGAC
ATGCAGCGCT GGCTGCAGGA CTGGATCCTC AACTACGTCG ATGGCGATCC CGCCCACTCC
ACCGAGACCA CCAAGGCGCA GCACCCGCTG GCGGCGGCCG AGGTGGTGGT CGAGGAAATC
GAAGGCAACC CCGGGTACTA CAGCTCGAAG TTCTTCCTGC GGCCGCATTA CCAGCTGGAA
GGGCTCACCG TGTCGTTGCG CCTGGTGTCG AAACTGCCCT CGGCCAAGGG CGCTTGA
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| Protein sequence | MAETMTEQQA QAGTATAEGG DFAALLLQEF KPKTERAREA VETAVRTLAE HALAKTDLIS
NDAIKSIESI IAAIDAKLTE QINLIMHHQD FQQLESAWRG LSYLVNNTET DEQLKIRVMS
ISKGELHKTL KKFKGTAWDQ SPIFKKMYEE EYGQFGGEPY GCLVGDYYFD QSPPDVELLT
ELSKVCAAMH APFISAASPT VMGMGSWQEL SNPRDLTKIF TTPEYAAWRS LRESEDARYI
GLTMPRFLAR LPYGAKTDPV DAFAFEEDTS GADSSKYTWA NSAYAMAVNI NRSFKLYGWC
SRIRGVESGG EVTNLPAHTF PTDDGGVDMK CPTEIAISDR REAELAKNGF MPLLHKKNTD
LAAFIGAQSL QKPAEYDDPD ATANANLAAR LPYLFATCRF AHYLKCIVRD KIGSFKEKDD
MQRWLQDWIL NYVDGDPAHS TETTKAQHPL AAAEVVVEEI EGNPGYYSSK FFLRPHYQLE
GLTVSLRLVS KLPSAKGA
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