| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2313 |
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| Symbol | |
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| ID | 5108548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2549688 |
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| End bp | 2552744 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503555 |
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| Product | protein kinase |
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| Protein accession | YP_001187803 |
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| Protein GI | 146307338 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000403487 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATATCG AAATACCGGG GTACGAGATC GAGCGCGAGC TGGGCGACGG CGCCATGGCC
GTGGTCTACC TGGCCACCCA GCGCTCGCTG GAGCGCAAGG TCGCGCTCAA GGTGATGGCC
GCGGCGCTGG CTGCCGACCC CAGCTTCTGC GAGCGCTTCC TGCGCGAGGG CAAGACCCTG
GCGCGGCTGT CCCATCCCAA TACCGTGACC ATCCACGACA TCGGCAATGT CGGCAGCCAT
TACTACATGG CCATGGAGTA CCTGCCCAAC GGCACGCTGA AGGAGCGCAT CGCCGCCGGG
CTGAGTGCGG AGCAGGGCAT CCAGTACCTG CGCCAGATCG CCTCGGCGCT CGGCTATGCC
CATGCCCAGG GCCTGGTGCA CCGCGACGTC AAGCCGGCCA ACATCCTGTT CCGCGCCGAC
GGCACCGCGG TGCTGTCGGA CTTCGGCATC GCCAAGTCGC TGGAAGACCG TACCCAGTTC
ACCCAGGCCG GCTTCGCCGT CGGCACCCCC AGTTACATGA GCCCGGAGCA GGCACGCGGC
CAACAGGTCG ACGGGCGTAC CGACCTCTAT GCCCTGGGCG TGGTGCTCTA CGAGATTCTC
ACCGGTCAGC TGCCCTACGT CGGCGCCGAT TCGCTGTCCA CCGCGCTGGC CCACCTCACC
CAGCCACTGC CCGAGCTGCC GATTGCCCAG GGGCGCTACC AGCCCATCCT CAGCCGCCTG
CTGGCCAAGG ACCCGGCCGA TCGTTTCCCC GATGCCGCGG CGCTGATCAA GGCGCTGGAC
GAACTGGCCG CCAGCCCGGT CACCGCAGCA ACCGGCGGCG ACAGCGAAGC CACCCAGTTC
CGCCCGCTGG GCCTGCCGGA CGCGCCGGCG CAGCGCTCCA TGCCGACCGA CCTCGGCGGC
CTGCAGGCGG TTTCGGTAAG CATGCCATCG GCGCAGAGCG ACGCACCGCG CCCAACCGAG
GAGCATCCCA CCCGCGTCCC GCCTGCCAAA CCCGCGGTGC AAGCCGCACC TTCGCGCAGC
CCGATGCTGG CGATAGCGGC ATTGGCGCTG CTCGGTCTGC TGGTGCTGGC CGGCGGTAGC
TACTGGTTGT TCAGCGGTTC GCCCAAACCG CCGTCACCCG AGCAGGCGCA GAGCGACCCA
GCGGCGGACG ATGCGAAGCC GCCGGTGGTA AGCGAAGGCA CGCCCGGCGC CCTGGCCACA
GACGGCGGCG AGCGCCCGCT GCTGATGCCG GGCAAGAAGA CCCTGTTCCA GCGCGTGCTG
AGCAAACCCG ATGCGCGTCT GGCCAGTGAA CCCGGTCAGG CCGCACAGGG GCGCGAGCTG
CCGGCCTTTT CGGTGCTCTA CGTCTACCGC CGTGAAGAGC AGGGCGGCCG CACCTGGCTG
CAGGTGGGCG CCTCCAGCGA TGGCACGCGC GACGGCTGGC TGGCGGCGGA TCAGGCCAGC
GACTGGAAAC AGAGCCTGGT GCTCAAGTTC ACCGAGCGCT CCGGGCGCTC GCCGGTGATG
TTCCTCGACA GCCGCAGCAC CCTGGAGCAG TACCTGGCCG ACCCGGCCAC GGCCCGCACG
GCGCTGCACC AGGCCCGCTA CGAGACGGCG CCGCCCGAAG TGATCGCGCT GGAGCCGGCC
GCCAACGCCA TCCCGCAGGA GCAGTTCTAT CTGCTGCCGA TCTTCGATTC GGCCGAAAGC
TACGACGCCG GCGGCGCGCC GGTGCAGCTG CTCAACGTGG CCTCCATCGA CCCGGGCGAC
GCCGAAAAGG TGATCGGCGA CGGCAGCCAG CGCTACCAGC ACGACAAGTT CCGCACCGGC
ATCGTGCTGG TGGTCGATAC CTCGGTGTCC ATGCAGCCCT ACATCGACCG CGTGGTGCGA
GTGGTGGACG AGCTGCACAA GCAGATCGCC AGCCGCGGCG ACCTGGACAA CGTCAGCTTC
GGTCTGGTGG GCTTTCGCAG CAACGTCGAC AAGACGCCGG GGCTGGAGTA CGTCACCCGC
ACCCTGGTGA CCCTGGAAGA GGGCAGCGAC CCGCAGCGTT TCGTCGACCT GGCGCGTCAG
GTCAAGGCCA CCAGCGTCTC CAGCCACGCT TTCAACGAGG ATGCCTTCGC CGGCGTGATG
GAGGCCGTGG AAGGCATGGA CTGGACGCCC TACAGCGGCC GGCTGATCCT GCTGGTCACC
GATGCCGGGG CGCTGCGCAA GAACGACCCG CTGAGCCGCA CGCAGATGAA CGAGGCCGAG
GTGCGCGAGG CGGCACTGCG CAAGCAGATC AAGATCTACG CGCTGCACCT GCGCACGCCC
ATCGGCCGCG ACAACCACGG TTTCGCCGAA CAGCAGTACC GCAGCCTGAC CGCCGATGCC
AACCCGCTGA TCGGCGACCT GTACATCCCG GTGGCCGACG GCGAGGTGGA AAAGTTCGGG
CAGACGGTCA AGGAGATCGG GATGATCTTC GCCGAACTGG TCAATCAGGT GGCCAACAAC
CAGGTCCAGG CGCCGTCCGA ACACCAGTCC ACGCGCAGCA TCGCGGCCAA GAGCAATGCC
ATCGGCTATG CCATGCAGAT GGACTTTCTC GGCCGCCGCT CGGCCACCCA GGCACCGCAG
CTGGTCACTG CCTGGACCGC CGATCATGAC CTGACCAACC CCTCGCTACC GGCCTTCCAG
GTCTGCGTGC TGCTGACCAA GCTGCAGCTC AACGACCTGC AGCAGTCGCT CAAGCTGATC
GTCGACGCGG CGCGCCGTAC CCAGTCCTCG CCCAAGGATT TCTTCCAGGA AATCGCCAGC
GCCAGTGCCT ACATGAGCCG CGACCCCAGC GGCCTGAGCC AGGGCCGCAA CCTGGCCGAG
TCCGGCATCC TCGGCGAGTA CCTGGAAGGG CTGCCGTACC GCAGCAAGTC GCTGAACATG
ACCCAGGAGC TGTGGCTGTC GCTCAGCGTC GCCGAACAGC AGGACTACAT CGACGAGCTG
GAATCGAAGA TCCGCCTGTA CGAAACCTTC CACAACGACA TCGGCCACTG GGTGCGCTTT
GGCGATGCAC AACCGGGCGA CGCGCTGTAC CGCGTGCCGC TGGCGACGCT GCCCTGA
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| Protein sequence | MDIEIPGYEI ERELGDGAMA VVYLATQRSL ERKVALKVMA AALAADPSFC ERFLREGKTL
ARLSHPNTVT IHDIGNVGSH YYMAMEYLPN GTLKERIAAG LSAEQGIQYL RQIASALGYA
HAQGLVHRDV KPANILFRAD GTAVLSDFGI AKSLEDRTQF TQAGFAVGTP SYMSPEQARG
QQVDGRTDLY ALGVVLYEIL TGQLPYVGAD SLSTALAHLT QPLPELPIAQ GRYQPILSRL
LAKDPADRFP DAAALIKALD ELAASPVTAA TGGDSEATQF RPLGLPDAPA QRSMPTDLGG
LQAVSVSMPS AQSDAPRPTE EHPTRVPPAK PAVQAAPSRS PMLAIAALAL LGLLVLAGGS
YWLFSGSPKP PSPEQAQSDP AADDAKPPVV SEGTPGALAT DGGERPLLMP GKKTLFQRVL
SKPDARLASE PGQAAQGREL PAFSVLYVYR REEQGGRTWL QVGASSDGTR DGWLAADQAS
DWKQSLVLKF TERSGRSPVM FLDSRSTLEQ YLADPATART ALHQARYETA PPEVIALEPA
ANAIPQEQFY LLPIFDSAES YDAGGAPVQL LNVASIDPGD AEKVIGDGSQ RYQHDKFRTG
IVLVVDTSVS MQPYIDRVVR VVDELHKQIA SRGDLDNVSF GLVGFRSNVD KTPGLEYVTR
TLVTLEEGSD PQRFVDLARQ VKATSVSSHA FNEDAFAGVM EAVEGMDWTP YSGRLILLVT
DAGALRKNDP LSRTQMNEAE VREAALRKQI KIYALHLRTP IGRDNHGFAE QQYRSLTADA
NPLIGDLYIP VADGEVEKFG QTVKEIGMIF AELVNQVANN QVQAPSEHQS TRSIAAKSNA
IGYAMQMDFL GRRSATQAPQ LVTAWTADHD LTNPSLPAFQ VCVLLTKLQL NDLQQSLKLI
VDAARRTQSS PKDFFQEIAS ASAYMSRDPS GLSQGRNLAE SGILGEYLEG LPYRSKSLNM
TQELWLSLSV AEQQDYIDEL ESKIRLYETF HNDIGHWVRF GDAQPGDALY RVPLATLP
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