| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2312 |
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| Symbol | |
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| ID | 5108547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2548984 |
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| End bp | 2549688 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640503554 |
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| Product | ABC transporter related |
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| Protein accession | YP_001187802 |
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| Protein GI | 146307337 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.248823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0000468431 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCGCC TGCGCGACAT CGGCAAGAGC CGACCGGGTT ACCGCCTGCA GGTGCCGCGC
CTGGACCTGC GCCCGGGGCA GCGCCTGGCG CTGGTCGGGC CCAGCGGCAG CGGCAAGAGC
ACCTTGCTCG ATCTACTGGC CCTGGTACTC AGCCCCGACC CCGGCGGTGC CCTGGAATTC
ACCCGCGACG GGCAGACCCG CGATATCGCC GCGCTGTGGC GGCACGATCG CCAGGATCAG
CTGGCCGAGC TGCGCAGCCG GCTGATGGGC TACGTGCTGC AGACCGGCGG GCTGCTGGGT
TTTCTCGACG TGCGCGGCAA TATCGGCCTG TCGCGCGCCT TGCTCGGCAT GCCCGACGAC
GTCACCGTGC AGCGCCTGGC CGAGCGCCTG GAAATCGCCG ATCAGCTGGA CAAGCTGCCG
GCCGCGCTGT CGGTGGGCCA GCGGCAGCGC GTCAGCATCG CCCGCGCCCT GGCCCACGGC
CCGGCCCTGG TGCTGGCCGA CGAACCCACC GCATCGCTCG ACCCGCTCAA TGCCGAGCGG
GTCATGCAGC TGCTGGTGGA GCGCGCGCAG GAGCAGGGCG CCTGCATCCT CATCGCCACC
CATGACGAAG CGCTGGCCCG GCGCGTCGGG CTGCAGCCGT TGCGCCTGGC GGTGGAGCGC
GGCGAGCAGG GCGGCGTGCT GGCGACCCTG CAGGAGGCCG GCTGA
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| Protein sequence | MLRLRDIGKS RPGYRLQVPR LDLRPGQRLA LVGPSGSGKS TLLDLLALVL SPDPGGALEF
TRDGQTRDIA ALWRHDRQDQ LAELRSRLMG YVLQTGGLLG FLDVRGNIGL SRALLGMPDD
VTVQRLAERL EIADQLDKLP AALSVGQRQR VSIARALAHG PALVLADEPT ASLDPLNAER
VMQLLVERAQ EQGACILIAT HDEALARRVG LQPLRLAVER GEQGGVLATL QEAG
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