Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2266 |
Symbol | |
ID | 5109209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2494600 |
End bp | 2495610 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640503508 |
Product | cytochrome c, monohaem |
Protein accession | YP_001187756 |
Protein GI | 146307291 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.380948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0167103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGAAGGA AACGGCGACG CCTGCTGCAG CGTCCCTGTC TGAAATGGAC CGCGCTGACG CTGGCAGTTC CATTGCTCGT TGCCTGCCAG GGCCCGCAAT CGGCACTCGA CCCCGCCGGG CCGATGGCAC GCGAGGTGGC GCTGCTGTGG TGGGCGATGT GCGCGTTCGC CACCCTGGTG CTGGTGGTGG TGACCGCGCT GTGGCTGCAC GCCATGCGCC GCCAGCCGCG CGAAGTGGAC GCCGCTCGCG CACGGCAGCT GACGCTGCGC TGGCTGGTGG GGGGCGGTCT GCTGCTGCCG ACGCTGAGCA TCATCGTGCT GCTGGCGTTC GGCATTCCCA TCGGTCATCG CATGCTGCCC TTGCCGCTGG ACGAGCCGCC GCTGCGCATC GAGGTGGTCG GGCACCAGTG GTGGTGGGAG GTGCGCTACC CGGAAAGCGG CGTGGTCACC GCCAACCAGC TGCATCTGCC GACGGGGCGT CCGGTGGACC TGGACGTGAG CAGCGCCGAC GTCATCCATT CCTTCTGGGT GCCGCGCCTG GGCGGCAAGA TCGACATGAT CCCCGGCCGC GACAACCGCA TCCGCCTGCA GGCCGATCAG CCCGGCGTGT TTCGCGGACA GTGCTCGGAA TTCTGCGGCA CCCAGCACAG CCACATGATT CTCGACGTGC ATGCCCACAG CGAGGACGAC TTCCAGGCCT GGCTGCAGGC CCGTAGTGAG CCGCAGATCA GCCCCCTGCC CGGCCCGGCC GGCGAAGCCT TCCAGGCGCG CTGTGGCCAG TGCCACCGCG TCGCCGGCGT CAGCGATGGC GAGCGGGCGC CCGACCTGAG CGACATCGGC TCACGCAAAA GCCTGGGCGC CGGCGTGCTG AGCAACGAGC CGGGCGCACT GCTGCGCTGG CTGCACGAAC ACCAGCGGCT CAAGCCTGGC AACGCCATGC CGCTGCACGA CGATCTCGAC CCCGACCACC TCAGCGCCAT CGCCGACTGG CTGGAGACCC TGGCACCGTG A
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Protein sequence | MGRKRRRLLQ RPCLKWTALT LAVPLLVACQ GPQSALDPAG PMAREVALLW WAMCAFATLV LVVVTALWLH AMRRQPREVD AARARQLTLR WLVGGGLLLP TLSIIVLLAF GIPIGHRMLP LPLDEPPLRI EVVGHQWWWE VRYPESGVVT ANQLHLPTGR PVDLDVSSAD VIHSFWVPRL GGKIDMIPGR DNRIRLQADQ PGVFRGQCSE FCGTQHSHMI LDVHAHSEDD FQAWLQARSE PQISPLPGPA GEAFQARCGQ CHRVAGVSDG ERAPDLSDIG SRKSLGAGVL SNEPGALLRW LHEHQRLKPG NAMPLHDDLD PDHLSAIADW LETLAP
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