Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2197 |
Symbol | |
ID | 5109142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2430113 |
End bp | 2430433 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640503441 |
Product | cytochrome c, class I |
Protein accession | YP_001187689 |
Protein GI | 146307224 |
COG category | [C] Energy production and conversion |
COG ID | [COG4654] Cytochrome c551/c552 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.353162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00157135 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCAAGA TCCCTGTTGT TACTGCCATC ACAAGCGGTC TGTTGTTGCT ACCGATGGCC CATGCCGATG TAACCCAGTT GCTGCAGAAC AACGCTTGCA CGGCATGTCA TCAGCCTGCA GCACGCACAG TGGGCCCCTC CTGGCAGGAG ATAGCGCAGC GTTACGGGGA CGGCAGCAAG AGTGCCGAAC AACTTGGCAG CAGCATAAAG AGTGGTAGCT CAGGCTCTTG GGGCGCCATA CCTATGCCTG CGCAGGCCCA GCTCAGTGAT GCCGATGCAA CGAGCATCGC TGAATGGATT TTGACTGCAC CTCACCAGTA A
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Protein sequence | MRKIPVVTAI TSGLLLLPMA HADVTQLLQN NACTACHQPA ARTVGPSWQE IAQRYGDGSK SAEQLGSSIK SGSSGSWGAI PMPAQAQLSD ADATSIAEWI LTAPHQ
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