Gene Pmen_2197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2197 
Symbol 
ID5109142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2430113 
End bp2430433 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content57% 
IMG OID640503441 
Productcytochrome c, class I 
Protein accessionYP_001187689 
Protein GI146307224 
COG category[C] Energy production and conversion 
COG ID[COG4654] Cytochrome c551/c552 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.353162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00157135 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCAAGA TCCCTGTTGT TACTGCCATC ACAAGCGGTC TGTTGTTGCT ACCGATGGCC 
CATGCCGATG TAACCCAGTT GCTGCAGAAC AACGCTTGCA CGGCATGTCA TCAGCCTGCA
GCACGCACAG TGGGCCCCTC CTGGCAGGAG ATAGCGCAGC GTTACGGGGA CGGCAGCAAG
AGTGCCGAAC AACTTGGCAG CAGCATAAAG AGTGGTAGCT CAGGCTCTTG GGGCGCCATA
CCTATGCCTG CGCAGGCCCA GCTCAGTGAT GCCGATGCAA CGAGCATCGC TGAATGGATT
TTGACTGCAC CTCACCAGTA A
 
Protein sequence
MRKIPVVTAI TSGLLLLPMA HADVTQLLQN NACTACHQPA ARTVGPSWQE IAQRYGDGSK 
SAEQLGSSIK SGSSGSWGAI PMPAQAQLSD ADATSIAEWI LTAPHQ