| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2190 |
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| Symbol | |
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| ID | 5109530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2421403 |
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| End bp | 2422656 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640503434 |
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| Product | outer membrane porin |
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| Protein accession | YP_001187682 |
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| Protein GI | 146307217 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0522869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0043507 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACAAGA AGCACTGTCT CGCGCTGGCC TGCAGCCTCG CGCTTGGCGG CCAGTTGGCT
CATGCCAGCA GCCAGTCCGA AGCCCAGGGT TTCGTCGAGG ACGCCAGACT CAATCTGTTG
CTGCGCAACG CCTACTTCCA CCGTGATTAC AAGGACAACG CCGCCGACGC CAAGACCTGG
GGCCAGGCCT TCATCACCAC TTTCGAGTCC GGTTTCACCC AGGGCACCGT CGGCTTCGGT
GTCGATGCCT TCGGCCTGCT CGGCATCAAG CTCGACAGCG GTCGCGGCCG CAACTATCGC
CCATTCTTCG ATACTGACAG CGAAGGACGC CCAGTGGACG AACTGTCCCA GGCCGGTGCT
GCGGTGAAGC TGCGCGTCTC CGATACCGTG ATCAGGTACG GCAACCAGTT CCCTTCCCTG
CCGGTTCTGG CCCATGACGA CAGCCGCCTG CTGCCGCAAT CCTTCACCGG CACGCTGGTC
ACCAGCAACG AGATCGAAGG TTTGGAACTG AATGCCGGTC GCTTCACCGC CGACAGCCCG
ATGGGCGACT CGGCACGCGA CCCCAACCGC CTCAAGAGCA TCGACGTGCT CGGCGGCAGC
TACACCCTTA GCGATGACCT GAGCCTGGCG GTCTACCACG CCGATCTCGA GGACATGTAC
AAGCGCTACT ACGCCAACCT CAATTACAAC CTGGCACTGG CTGCGGATCA GGCGCTGAAC
TTCGACTTCA ACATCTACCG CACCAAGTAC GACACCGGTT CGGTGGCCGC AATCGATCTC
GGCGGCGATG GCCAGGGGGA CCGCAACACC ATCTGGAGCC TGGCGGCCAA GTACAGCATC
GGCGCCCATG CCTTCATCGT CGCGCACCAG CGCAACAGCG GCGATGCCGG CTTCGCTTAT
GACTACGGCG ATGGCGGCGC CAGCATCTAC CTGGCCAACT CCTACTACTC GGACTTCAAC
CTGAAGGACG AGCGCTCCTG GCAGGCCAGC TACGAGCTGG ACTTCGCCCA GTACGGCGCG
CCGGGGCTGC GCTACAAGTT CGCCTACGTA CGCGGCGACA ACATCGACAC CGGCAGCGAC
AACAACGGCA CCGAGCGCGA GATCTTCAAC CAGGTCAGCT ACACCGTGCA AAGCGGTGCG
GCCAAGGATC TGCACCTGCG TCTGCGCAAT TCCATCTACC GCTCCAGCAC CGATGTCGGC
CCGGATCTCA ACGAGATTCG CGCCTTCATC GAATACCCGC TGAGCATCCT CTGA
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| Protein sequence | MHKKHCLALA CSLALGGQLA HASSQSEAQG FVEDARLNLL LRNAYFHRDY KDNAADAKTW
GQAFITTFES GFTQGTVGFG VDAFGLLGIK LDSGRGRNYR PFFDTDSEGR PVDELSQAGA
AVKLRVSDTV IRYGNQFPSL PVLAHDDSRL LPQSFTGTLV TSNEIEGLEL NAGRFTADSP
MGDSARDPNR LKSIDVLGGS YTLSDDLSLA VYHADLEDMY KRYYANLNYN LALAADQALN
FDFNIYRTKY DTGSVAAIDL GGDGQGDRNT IWSLAAKYSI GAHAFIVAHQ RNSGDAGFAY
DYGDGGASIY LANSYYSDFN LKDERSWQAS YELDFAQYGA PGLRYKFAYV RGDNIDTGSD
NNGTEREIFN QVSYTVQSGA AKDLHLRLRN SIYRSSTDVG PDLNEIRAFI EYPLSIL
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